Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3234 |
Symbol | |
ID | 5456678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3452164 |
End bp | 3453465 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640878824 |
Product | Orn/DAP/Arg decarboxylase 2 |
Protein accession | YP_001414496 |
Protein GI | 154253672 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.17502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGCTT CCGAGCAGGG CCGCCGTGCC CGTTCGCGCA TCTCCATGAA ATCCGCCGCG AAGTCGGTTC CCGCCACTAA GCCGGGTGCG CCCGTCAAGT CGGGTCCGCG TCGCAAGCCT CGTCTGCGGC TCGTGCCGAA GGCGGCCGAG CTGCCGCTGG ATCGCGGCGG CCTGCCGCCC AAGATCGCGC GCTATCTCGC GACCGCCGAT CTGCCGTCGC CTTGCCTCGT TGTCGACGTC GACATCGTCG CCCACAACTT CGGGGAACTG GCCAGCTCGC TTCCCGATGC GCGCATCTTC TATGCCGTGA AGGCGAACCC TGCCGACGAG ATCGTCTCCC GCCTCGCGGG CCTCGGCTCG TCCTTCGACA CCGCCAGCAT GGGCGAGATC GACCTCTGCC TCTCGCACGG GGTTTCGGCC GACCGTCTGT CCTTCGGCAA CACGATCAAG AAGGAGCGCG ACATCGCGGC TGCCTATGCC AAGGGCGTCC GCATGTTCGC CTTCGACAGC ACCGCCGAGC TCGACAAGAT CGCGCGCGTC GCTCCGGGAT CGAAGGTCTA TTGCCGCGTG CTCATGGAAT GCGAAGGCGC CGAATGGCCG CTCTCGCGCA AGTTCGGTTG CGAGCCGGCC ATGGCCGTTG ACCTGCTCGT GCGCGCGAAG GCCCTCGGCC TCGATGCCTA TGGCGTGTCG TTCCACGTCG GCTCGCAGCA GACCGATCTC ACGCAATACG ACAAGGCGCT GGCCCTTTCG CTGTCGCTCT TCCGCGATCT CGAAGCGCGT GGCGTCAAGC TTCGCATGGT CAACATGGGC GGCGGTTTCC CGTCCCGCTA CCGCACCGAT GTGCCCTCGA TCTCCGCCTA CGGCGCGGCG ATCCGTGAGG CACTTTTGCG ACACTTTGGT GACAGTCAGC CGGATGTCAT CGTCGAACCG GGCCGCGGCG TCGTCGGCGA TGCCGGTGTC ATCCAGGCAG AAGTCGTTCT CGTCTCGGAG AAGGGCGGCG ACGACGCCCG ACGATGGGTC TATCTCGATG CCGGCAAGTT CCACGGCCTC GCCGAAACCA TGGACGAGGC GATCAAATAC CGCCTCCTGA CATCGCGCGA TGGCGGCGAG ACCTCGCCAG TCGTCCTTGC CGGTCCGACC TGCGACAGTG CCGACATCCT CTACGAGAAG ACGGACTATC GTCTCCCGTC GGAGCTGGAG GCTGGCGACA AGGTCTGGAT CCTCGCCACG GGCGCCTACA CGACGACCTA CTCGGCCGTC GCGTTCAATG GCTTCCCGCC GCTGGCAAGC GTCTGCATCT GA
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Protein sequence | MFASEQGRRA RSRISMKSAA KSVPATKPGA PVKSGPRRKP RLRLVPKAAE LPLDRGGLPP KIARYLATAD LPSPCLVVDV DIVAHNFGEL ASSLPDARIF YAVKANPADE IVSRLAGLGS SFDTASMGEI DLCLSHGVSA DRLSFGNTIK KERDIAAAYA KGVRMFAFDS TAELDKIARV APGSKVYCRV LMECEGAEWP LSRKFGCEPA MAVDLLVRAK ALGLDAYGVS FHVGSQQTDL TQYDKALALS LSLFRDLEAR GVKLRMVNMG GGFPSRYRTD VPSISAYGAA IREALLRHFG DSQPDVIVEP GRGVVGDAGV IQAEVVLVSE KGGDDARRWV YLDAGKFHGL AETMDEAIKY RLLTSRDGGE TSPVVLAGPT CDSADILYEK TDYRLPSELE AGDKVWILAT GAYTTTYSAV AFNGFPPLAS VCI
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