| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3211 |
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| Symbol | |
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| ID | 5455085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3427051 |
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| End bp | 3428754 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878800 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001414474 |
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| Protein GI | 154253650 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.268478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGT CTGCTTCCGT TGCCTCCCCC CATGCGCCCG GCGCGCATGA TGAGCTGATC
TTTCTGCCCC TTGGCGGCTC GGGCGAGATT GGGATGAACC TCAATCTCTA TGGCTTTGGC
CCGCCAAAGG CGCGTCAGTG GATCATGGTC GATCTCGGCG TGACCTTCGG CGACGACCGC
ACCCCCGGTG TCGACGTCAT CATGCCGGAT CCCGCCTTCA TTGTGGAGCG CAAGAAAGAC
CTGCTCGGCA TCGTGCTGAC CCACGCCCAT GAGGATCACA TAGGCGCCGT CGCGCATATC
TGGCCGCGTC TGCGCTGCCC CGTCTACGCC ACGCCCTTCA CCGCCGCCAT GGTGCGCGGC
AAGCTCATCG AGGCCGGCAT CGAAAACGAA GTGCCGATGC ACATCATCCC CCTCGGTCAC
CGCTTCGCCC TCGGTCCCTT CGACATCGAA CTGGTAACGC TCACCCATTC GATCCTGGAG
CCGAACGGGC TCGCCATCCG CACGCCGCTC GGCCTCGTCA TGCATACGGG CGACTGGAAG
ATCGACCCCG ATCCCGTCGC CGGCGACGAC ATGGACATCG CCCGCCTGAG CGAAATCGGC
GACGAAGGCG TCCGCGCCAT CGTCTGCGAC TCGACCAACG TCTTCTCGCC CGGCACCTCC
GGCTCCGAGG CCGATGTCGC GTCGAGCCTC ATAGAACTCA TCAAATCCTG CGAGGGCAGG
GTGGCCGTCA CCACCTTCGC CTCCAATGTC GCCCGTCTCG AAAGTATCGC CCGCGCCGCC
GAAGCCTGCG ATCGGCACGC CGTGCTGGTC GGCCGCTCCA TGTACCGCGT CGTCGGCGCC
GCCCGCGAAT GCGGTTATCT CACCGGCCTC GCGCCCTTCG TCAGCGAGCA TGACGCCGCT
TATCTTCCGC GAGACAAGGT GCTGTTCATC TGCACCGGGT CGCAGGGCGA GCCGCGTGCC
GCGCTTGCCC GCATCGCCGA GGACGGTCAT CCCCACATCG TGCTGGAGGA GGGCGACACC
GTCGTCTTCT CGTCCCGCAT CATCCCCGGC AATGAAACCT CGATCTTCGA CCTGCAGAAC
CTGCTGGCCG AGCGCGGCGT CCGCGTCGTC ACCGAGAAGG ACCACTTCGT CCACGTCTCG
GGCCATCCCT GCCGCGATGA GCTCGCCCGC ATGTATCAAT GGATCAGGCC GGAAGTCGCC
GTGCCGGTTC ATGGCGAGGC CCGCCACCTC GCGGAACATG CCGTCCTCGC GCGCGAGCTT
CAGGTGCCGG AGCAGGTGGT CATCCGCAAC GGCCTCATGG TCCGCCTGGC GCCGGGCCCG
GCCGAAATTG TCGGCGAGGT CCCCTCGGGC CGCATCTATC TCGATGGCGA TGTATTGACC
GAGTCCGATG AGGGCGCGGT CCGCGAAAGG CGCAAGCTCG CCTTCGCCGG CTCCGTCTTC
GTCAGCCTGG TGCTGGACGG CAAGGGAGAG GTCCGTGGCG AGCCGCAGGT CCGCCTCATG
GGCCTGCCCG AGGAAGATGG CAACGGCGTC TCCTTCGAGG ACCGGGCGCT GGATGCGGTG
GAGGACGCCC TCGACCGCCT GCCGAAAAAG CGCCGCGGCG ACGACGATGC CGTAGCGGAA
TTCCTGCGCC GCGCCGTCCG TGGGGATATC CGCCGCTACT GGGGCAAAAA GGCCCAGGTC
GCCATCGCCG TCATCCGCAT CTGA
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| Protein sequence | MSMSASVASP HAPGAHDELI FLPLGGSGEI GMNLNLYGFG PPKARQWIMV DLGVTFGDDR
TPGVDVIMPD PAFIVERKKD LLGIVLTHAH EDHIGAVAHI WPRLRCPVYA TPFTAAMVRG
KLIEAGIENE VPMHIIPLGH RFALGPFDIE LVTLTHSILE PNGLAIRTPL GLVMHTGDWK
IDPDPVAGDD MDIARLSEIG DEGVRAIVCD STNVFSPGTS GSEADVASSL IELIKSCEGR
VAVTTFASNV ARLESIARAA EACDRHAVLV GRSMYRVVGA ARECGYLTGL APFVSEHDAA
YLPRDKVLFI CTGSQGEPRA ALARIAEDGH PHIVLEEGDT VVFSSRIIPG NETSIFDLQN
LLAERGVRVV TEKDHFVHVS GHPCRDELAR MYQWIRPEVA VPVHGEARHL AEHAVLAREL
QVPEQVVIRN GLMVRLAPGP AEIVGEVPSG RIYLDGDVLT ESDEGAVRER RKLAFAGSVF
VSLVLDGKGE VRGEPQVRLM GLPEEDGNGV SFEDRALDAV EDALDRLPKK RRGDDDAVAE
FLRRAVRGDI RRYWGKKAQV AIAVIRI
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