Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3134 |
Symbol | |
ID | 5454653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3347146 |
End bp | 3347640 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640878724 |
Product | CinA domain-containing protein |
Protein accession | YP_001414398 |
Protein GI | 154253574 |
COG category | [R] General function prediction only |
COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.582332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTT TCCCTCGCCG CCTTGTTCAT CTCGCCGAAC TGACGCTTTC TGAAGCGAGT CAAGCTGAAC TCCGCATCGT TACAGCCGAA AGCTGCACGG GCGGACTGAT TGCCGGGCTG CTTACGGAAA TTCCGGGCTG CTCTTCAGTG GTTGAACGCG GCTATGTCGT TTACTCGAAC GATGCGAAGC GCGACATGCT GGGCGTGCCG GGGGATATGC TGGCGGATTT CGGTGCGGTC TCCGAACCTG TCGCGCGGGC GATGGCTGAG GGAGCGCTGA AGAATTCGAG AGCGGACCTC GCCGTATCCG TTACCGGTAT CGCGGGCCCT GACGGAGGCA CGCCGATGAA GCCCGTGGGA CTCGTTCACT TCGGCGCCGC ACGGAAAGGA CGCAGCATTC TTCATGAGGT GCACCGCCTC GGCGATATCG GGCGCGATGA AGTCCGGATG AAGAGTATCG AGGTTGCGCT CGGACTGATC CGGCGGATGA TCTAG
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Protein sequence | MSIFPRRLVH LAELTLSEAS QAELRIVTAE SCTGGLIAGL LTEIPGCSSV VERGYVVYSN DAKRDMLGVP GDMLADFGAV SEPVARAMAE GALKNSRADL AVSVTGIAGP DGGTPMKPVG LVHFGAARKG RSILHEVHRL GDIGRDEVRM KSIEVALGLI RRMI
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