| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3104 |
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| Symbol | |
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| ID | 5455381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3315252 |
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| End bp | 3315671 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878693 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001414368 |
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| Protein GI | 154253544 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.399378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCTCAA CGGGACGCAA CACAGTACCT CTGGACGACG ACTGGGAATC GCCTGCCGCC
GTCACTCTCG GCAAGAAGGT GTTGGAAAAG GATGCAGCTC GCGGCTACAT CCGCGCCTCT
TTTGAAGCAG GCGACGGGTT TCTCAACCGC GGCGGGCGCA TCTTCGGCGG CTTCCTTTCC
GCGATGCTGG ACGGGCTGTG TGGCCATGCT GTTCGGCTCA CGCATGAGAA GCCGGGAACG
CCGCAGGTGA CACTCGAGTT GAAAACGAGC TTTGTCGGCC GCGCCGACAA GGGAAAGCTG
GTCGGAGAAG GCTGGGTACG CCATCGAGGC AAGTCGATCG CCTTCGCGGA AGCCGAGCTT
CGAAACGAGG CCGGCGAACT CGTCGCGAAG GGCAGCGCCA CGTTCAAGAT CGGCATATGA
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| Protein sequence | MSSTGRNTVP LDDDWESPAA VTLGKKVLEK DAARGYIRAS FEAGDGFLNR GGRIFGGFLS
AMLDGLCGHA VRLTHEKPGT PQVTLELKTS FVGRADKGKL VGEGWVRHRG KSIAFAEAEL
RNEAGELVAK GSATFKIGI
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