Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3079 |
Symbol | |
ID | 5455428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3286872 |
End bp | 3288956 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640878668 |
Product | ATP-dependent DNA helicase RecG |
Protein accession | YP_001414343 |
Protein GI | 154253519 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1200] RecG-like helicase |
TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.187564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCTG AAATCCTTTT CCCGCTTTTC GCGCCGGCAC GCTCGCTGCC GGGCATCGGG CCGCGCCTGG AAGCACTGGT TGAGAAGCTC GCCGGTCCAA AGGTCATAGA TATTCTCTGG CACCTGCCCT CAGGCCTTAT CGACCGCCGG CACCGTCCCT CGATTGCCGA TGTGCGCGAC GGGGAGATAG CTACCATGGA GGTAACGGTA GGCCTGCATA TTCCGCCAAG AACGAAGCGT CTGCCCTACC GGGTGCATGT CTTCGACGAT ACCGGCGAAA TGCAGATCGT TTTCTTCAAC GCACGTGCGG AGCATCTCGC CAAGATATTG CCGGAGGGCC AACGCCGCAT CATTTCCGGC CGCGTGGAGT TCTATCAAGG TACGCCACAG ATGACGCATC CCGACCACAT GATCGGGCTC GACGAGTTGG CGGATCTTCC GCTCATGGAA CCCATATATC CACTCACGGC AGGCCTGCCG CTCAAATCCA TCCAGAAGGC TGTTCGCGGC GCGCTGCCGC GGCTGCCGGA ACTGCCCGAA TGGCAGGACG GACCGTGGCT CAAGGCACGC GGATGGACCA ACTGGCGGCA ATCGCTGATC GCCGCTCATG AGCTGCAATC TGCCGCCGAT CTCGGCGCTG ACGCCCCCGC ACGGGCGCGC CTCGCTTATG ATGAATTGCT CGCGAACCAG CTCGCGCTTG GCCTTGTCAG GCTGAGGATG CGCCGTCTGC CCGGCCGATC CATTTCCGCA CCGGGGCAGC TGAGGAAAAA GGTCGAGGCT GCCCTGCCCT TTGCGCTCAC AAATGCGCAG ATACGGGCGC TTTCGGAAAT CTCCGCCGAT ATGAAAAGCA ATCACCGTAT GTTGCGATTG TTGCAAGGCG ATGTCGGTAG CGGCAAAACC GTCGTCGCGC TTCTCGCCAT GCTCGATGCC GTGGAAGCAG GATTTCAGGC CGCCATGATG GCCCCCACGG AAATTCTCGC GCGCCAGCAT TATGCAACAT TGGCGCCTCT TTGCGACGCA GCGGGCGTGC GGCTCGAACT CCTGACGGGG CGGGAGAAAG GCAAGCGGAG GGAAGAAATC CTCGCGAGGG CTGCCGCCGG CGAGATCGAC ATACTCGTGG GCACGCATGC GTTGTTTCAG GAAGACGTCG CCTTCCGCGC CTTGGCATTT GCCGTCGTGG ATGAACAGCA CCGCTTCGGT GTGCATCAGC GCCTCATGCT GACTTCCAAG GGAGGAACCG GGACGGATGT GCTGGTAATG ACCGCAACGC CGATCCCGCG AACACTGACG CTGACGGCCT ACGGGGACAT GGACGTCTCG AAGCTCGATG AAAAACCGCC TGGACGGAAG CCCGTCGACA CGCGGGCCTT GCCGCTGGAT CGGTTGGGTG AGGTGGCTGC GGGGCTCGAC CGGGCATTGG CGCGGGGCGA CCAGATCTAT TGGGTCTGCC CACTTGTGGA AGAGTCGGAC GAGGTCGATG CCGCTGCAGC AGAAGAACGG CACCGGCATC TGCAGTCGAT CTATGGGGAG AAGGTCGGCC TTGTACATGG CCGGATGAAA GCCGCCGACA AGGACGCCGT GATGGCGCGC TTCCAGGCGG GAGATATCCG TATCCTCGTT GCCACCACCG TCATTGAAGT CGGCGTGAAT GTGCCGACGG CGACTGTCAT GGTAATCGAG CATGCCGAAC GGTTCGGCCT CGCACAACTG CATCAGCTGC GCGGGCGTGT CGGACGCGGC GGCGACAAAT CAAGCTGCCT GCTCCTCTAC CAGGCTCCCT TGGGGGAGAC CGCGGCGGCG CGGATCAAGA TCATGCGGGA AACCGAAGAC GGTTTCCGCA TCGCCGAGGA AGATTTGCGG TTGCGCGGCG CAGGCGAGCT GCTCGGCACT CGCCAGAGCG GCCTGCCGGA ATTTCGCCTG GCCAATATAG AGACGCAGCA GGAATTGCTG GCGGTTGCCT ATGACGATGC CCGGCTCATT CTCGATCGCG ACCCGGAACT TGAAAGCCCG AGAGGAGAAG CGCTGCGCAC GCTCCTCTAT TTGTTCGAGC GCGACGAAGC GATCCGCTAC CTACGTTCGG GGTGA
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Protein sequence | MRPEILFPLF APARSLPGIG PRLEALVEKL AGPKVIDILW HLPSGLIDRR HRPSIADVRD GEIATMEVTV GLHIPPRTKR LPYRVHVFDD TGEMQIVFFN ARAEHLAKIL PEGQRRIISG RVEFYQGTPQ MTHPDHMIGL DELADLPLME PIYPLTAGLP LKSIQKAVRG ALPRLPELPE WQDGPWLKAR GWTNWRQSLI AAHELQSAAD LGADAPARAR LAYDELLANQ LALGLVRLRM RRLPGRSISA PGQLRKKVEA ALPFALTNAQ IRALSEISAD MKSNHRMLRL LQGDVGSGKT VVALLAMLDA VEAGFQAAMM APTEILARQH YATLAPLCDA AGVRLELLTG REKGKRREEI LARAAAGEID ILVGTHALFQ EDVAFRALAF AVVDEQHRFG VHQRLMLTSK GGTGTDVLVM TATPIPRTLT LTAYGDMDVS KLDEKPPGRK PVDTRALPLD RLGEVAAGLD RALARGDQIY WVCPLVEESD EVDAAAAEER HRHLQSIYGE KVGLVHGRMK AADKDAVMAR FQAGDIRILV ATTVIEVGVN VPTATVMVIE HAERFGLAQL HQLRGRVGRG GDKSSCLLLY QAPLGETAAA RIKIMRETED GFRIAEEDLR LRGAGELLGT RQSGLPEFRL ANIETQQELL AVAYDDARLI LDRDPELESP RGEALRTLLY LFERDEAIRY LRSG
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