Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3070 |
Symbol | |
ID | 5455610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3277908 |
End bp | 3279110 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640878659 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_001414334 |
Protein GI | 154253510 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.430335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGCAG GTATCAAGGA CAAGGTCGCG ATCCTCGGCA TGGGTTGCTC GAAATTCGGC GAACGCTGGG ATGCAGGCCC TGAGGAACTG ATGGTCGAGG CCTATCTCGA AGCCATGCAG GACGCCGGCA TCGAACCGAC GCAGCTCGAC GCGGCCTGGT TTTCGACGCA TATCGACGAA ATCGGCACCG GCAAGGGCGG CACGCCGCTT TCGGTCGCGC TCAGGCTTCC GAACATCGCG GTAACGCGCG TGGAAAACTT CTGTGCCTCA GGCTCGGAAG CCTTCCGCGG TGCCGTTTAC GCGGTCGCCT CGGGAGCTGC CGATATTGCG CTCGCGGTCG GCGTCGAGAA GCTCAAGGAC ACAGGCTATG GCGGCTTGCC GGTCGGCAAC ATGGGGACGC TCAATCCGCA GTGGTCGCCG TCGGGTTCCG CACCCGGCAA CTTCGCGCAG CTTGCTTCCG CCTACCGGGC GAAGCATGGC GTCAGCAAGG AAGACCTCAA GCGCGCGATC GCGCATGTTT CCGTGAAGAG CCATGCCAAT GGCGCGAAGA ACCCGAAGGC TCATCTCCGC AATGAGGTGA CGGAAGATCA GGTGATGAAC GCCCCGATGA TCGCCGAACC GTTGGGCCTC TTCGATTGCT GCGGCGTGTC CGACGGTGCG GCAGCGGTGA TCGTTACCAC GCCGGAAATC GCCAAGGCCA TGGGCAAGAA GGACATCGTC ACCGTGAAGG CGATGCAGCT TTCGGTCTCG AACGGCCTCG AATCCCAGCA CAACAGCTGG GATGGCAGCT ATTTCCACAC GGCGCGGATC GCGGCCAAGA AGGCCTACAA GGAGGCCGGC ATCGACAATC CGCGCGAGGA AGTCAGCATG ATGGAGGTGC ATGACTGCTT CTCCATCACC GAACTTGTTA CAATGGAAGA TCTTTTTATC TCGCCGGAAG GTGGGGCCGT GAAGGACGTC ATGGACGGGT TCTACGATGC CGATGGCAAG GTCCCGTGCC AGATCGATGG CGGCCTGAAA TGCTTCGGGC ATCCCATCGG GGCATCCGGC CTGCGCATGG CCTATGAGAT GTATCTCCAG CTTCAGGGCC GGGCAGGCGA GCGGCAGCTT GCCAATCCGA AGATTGGATT GACGCACAAT CTGGGCGGGG CCCCCTCCCA GAATGTCTGT TCGGTGACGA TTATCGGCGC GCAAGGCGCG TGA
|
Protein sequence | MAAGIKDKVA ILGMGCSKFG ERWDAGPEEL MVEAYLEAMQ DAGIEPTQLD AAWFSTHIDE IGTGKGGTPL SVALRLPNIA VTRVENFCAS GSEAFRGAVY AVASGAADIA LAVGVEKLKD TGYGGLPVGN MGTLNPQWSP SGSAPGNFAQ LASAYRAKHG VSKEDLKRAI AHVSVKSHAN GAKNPKAHLR NEVTEDQVMN APMIAEPLGL FDCCGVSDGA AAVIVTTPEI AKAMGKKDIV TVKAMQLSVS NGLESQHNSW DGSYFHTARI AAKKAYKEAG IDNPREEVSM MEVHDCFSIT ELVTMEDLFI SPEGGAVKDV MDGFYDADGK VPCQIDGGLK CFGHPIGASG LRMAYEMYLQ LQGRAGERQL ANPKIGLTHN LGGAPSQNVC SVTIIGAQGA
|
| |