Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3037 |
Symbol | |
ID | 5456002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3237796 |
End bp | 3238746 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640878625 |
Product | protein-export membrane protein SecF |
Protein accession | YP_001414301 |
Protein GI | 154253477 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACATC TGAAACTCAT TCCGGACGAC ACGAATTTCC AGTTCGTCAA ATGGCGCTAT ATCGCCGTCG GCCTCTCGCT TCTAGTGATG GTTGTTTCAA GCGCGCTTCT GATTACACGC GGACTGAACT TCGGTATCGA TTTCGAGGGT GGCATTGTCA TCGAGATTTC GACTGACGGT CCGGCCGATA TTTCTCAGCT TCGTGCCGAT ATTGGTGGTC TCGATCTCGG TGAAGTCCAG ATTCAGGAAT TCGGCCAGGC CGACGACGTG TTGATCCGCG TCCAGTCGCC CAGGGACGGC GGAGAAGAAG CTTCGCAGGA AGTCGTCAAC AAAATCAGAG GCCAGCTCGG TGACACGGTC GAATACCGGC GCGTCGAGGT TGTGGGTCCG CAGGTGAGTG GTGAGCTTGT CCAGGACGGG ATTCTCGCTG TCGTCATCTC CATTGCGTTG ATGCTGGTTT ATATCTGGTT CCGCTTCGAG TGGCAGTTCA GCCTGGGTTC GGTCATAGCC CTCGTTCATG ACGTCATGGC AACACTTGGA CTGTTCTGTA TCCTGCAGCT CGAGTTCAAC CTGACCTCGA TCGCGGCCAT CCTCACCATT GTCGGTTATT CGATGAACGA TACGGTTATC GTCTTCGACC GCGTGCGCGA GAACCTGCGA AAATACAAGA AGATGGATCT CGGTGCCTTG ATCGATCTTT CGATAAACCA GACCTTGTCG CGCACCGTCA TGACCTCGGG TACTACGCTT CTCGCGCTTC TGGCACTTTT CATTTTTGGC GGGGAAGTGC TGCGCGATTT CACCTTCGCG ATGATCTTCG GCATTTTCAT CGGCACCTAT TCGTCTATCT TCATCGCGGC GCCGGTTCTG CTTACCGTCG GCGTCACGCG CGATGCATCG ACCGGCGGTC TGGGCCGCGC CGCCAAGGAC AAGGCGCCCG AAAAGGCGTG A
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Protein sequence | MRHLKLIPDD TNFQFVKWRY IAVGLSLLVM VVSSALLITR GLNFGIDFEG GIVIEISTDG PADISQLRAD IGGLDLGEVQ IQEFGQADDV LIRVQSPRDG GEEASQEVVN KIRGQLGDTV EYRRVEVVGP QVSGELVQDG ILAVVISIAL MLVYIWFRFE WQFSLGSVIA LVHDVMATLG LFCILQLEFN LTSIAAILTI VGYSMNDTVI VFDRVRENLR KYKKMDLGAL IDLSINQTLS RTVMTSGTTL LALLALFIFG GEVLRDFTFA MIFGIFIGTY SSIFIAAPVL LTVGVTRDAS TGGLGRAAKD KAPEKA
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