| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3011 |
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| Symbol | |
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| ID | 5456274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3214227 |
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| End bp | 3215063 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878599 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001414275 |
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| Protein GI | 154253451 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.652997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTTA TTGCCTCCGG CCATGACGCC GCCCTCTTTT TCCGGCACAC TGGCCAATCC
TGTGGTTCTC CCGAGGTGCT CATGACCGCC CGTAAAAGTC TCGCCGCACT TGCCGCCGCG
CTTGGCCTCA GCTTCACGCT GGCGGGCGGC GTCTTTGCCG ATCCGCTGCC GGAAACGCAG
GCTGCGTTCG ATCGTGGCGT CGCGGCTTAT CGCTCGGGCA ATGCCGAGGG TGCGGTGGAT
GAGTGGAAGG AAGCGGCTGA AGGCGGGCAC ACGGGCGCTG CCTGGCTCCT CGCCAATCTC
TACGACAAGG GTGCCGGCGG CGTCGCGCAG TCGGATGCGA AAGCCTATGA ATATTACCTG
CTCGCCGTGC GCGGCGGCCA GCCGGAAGCC GCCGTCCGCC TCGGCGTCAT CTATCTCAGC
GGCAATGAGG CCATCGGGCT GAAGCGCAAT TACGAGCAGG CGCTGCGCTC CTTCGAGGCT
GCCTCCCTCG CGCCCCGGGC CGATGCGCAA TATTATCTCG GCATCATGCA TCGCCGGGGC
TGGGGCACGC CGGTCGACCG CACGGAAAGC CTGCGCTGGC TCCTCCTCTC CGCAAAGAAG
CGTTACGGTC CCGCCCTCAC CGAACTCGGC CGCGTCTACA TGGAAGGCGA GGGCGTGGAG
CGAGATCGTG TCGAAGGCTG GAGCTATCTC CTCCTCGGCA AACGCTTCGG CACGCCGGAA
CAGGGCGCCG AAGCCGACGC GCTGATGGAG AAATACGATG GCTGGATGAA GCGCGGCGAA
AAAGACAGCG CCCGCGACAT GGCCGACACC TGGGTCTCCG CCCATGGCGG GGCGTGA
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| Protein sequence | MGVIASGHDA ALFFRHTGQS CGSPEVLMTA RKSLAALAAA LGLSFTLAGG VFADPLPETQ
AAFDRGVAAY RSGNAEGAVD EWKEAAEGGH TGAAWLLANL YDKGAGGVAQ SDAKAYEYYL
LAVRGGQPEA AVRLGVIYLS GNEAIGLKRN YEQALRSFEA ASLAPRADAQ YYLGIMHRRG
WGTPVDRTES LRWLLLSAKK RYGPALTELG RVYMEGEGVE RDRVEGWSYL LLGKRFGTPE
QGAEADALME KYDGWMKRGE KDSARDMADT WVSAHGGA
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