| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2889 |
|---|
| Symbol | |
|---|
| ID | 5455075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3092629 |
|---|
| End bp | 3093132 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640878471 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001414153 |
|---|
| Protein GI | 154253329 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.000416849 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAA CGAAAAATAC CGCCGTAGAG GTCGCGGACA CCGCCGGAGA CGATCTCTTT
CTTCCCGATC ATTTCCTGAA GGCGATCAAC GATGTCGGCA CAATGCTGGC AACCATCTAC
GACCGTCGCA CTGGCCTCAC CCGCAACCAG ACACGAATCG TCATCGCACT CCTCGAAACG
GATGGGCAGA CGCAGACCGA GCTTGCAAAC GCGCTCAGCA TCCACAAGGT CTCCGTCGGG
ATCTATCTGA ACGAGCTGGA ATCGCTCGGC CTTGTCGAAC GTCGCATCCA TCCGACGGAC
GGCCGCGCCA AATGCATTTA TCTCACGCCC CTGCTCCACG CGAGCAAGCA CATCGCGCGC
GATCACTACG CCGCTATCCA TAGTGAGGCG ATCGCGGGGA TCAATGAGAA GGACTACATC
GCCATGCTGA GATGCATGGA CAAGATGCGC AAGAACCTGG AAGTGCTCGA TACGAAAGAC
CGCAAGGCCC GCCGCAAGGG GTGA
|
|---|
| Protein sequence | MSQTKNTAVE VADTAGDDLF LPDHFLKAIN DVGTMLATIY DRRTGLTRNQ TRIVIALLET
DGQTQTELAN ALSIHKVSVG IYLNELESLG LVERRIHPTD GRAKCIYLTP LLHASKHIAR
DHYAAIHSEA IAGINEKDYI AMLRCMDKMR KNLEVLDTKD RKARRKG
|
|---|
| |