| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2856 |
|---|
| Symbol | |
|---|
| ID | 5456867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3060131 |
|---|
| End bp | 3060940 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640878438 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_001414120 |
|---|
| Protein GI | 154253296 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.23211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACAAC TGAAAAGGGA ACAAGAATTT GGCGATGACC CGCTGGCGAG GCGGGAGACG
GACAACTACC AGAACGAATA TGTCGAGTCG TTCGTAGATA AATGGGACGA TCTCATCGAT
TGGGACAGCC GGGCCGAGAG CGAGGGGCAC TTTTTCATCG ATATTCTGAA GGAGCGCGGA
AAGCACAAGG TGCTGGATGT TGCGACCGGA ACGGGCTTCA ACTCCGTGCA GCTGCTGAAA
GCGGGATTCG ACGTTACGAG CGTCGACGGC AATGCCGAGA TGCTTTCAAA GGCTTTCGCA
AATGCCCGGG ATCACAGTTT TGTCATGCAG ACGGTTCATG CCGATTGGCG CTGGCTGAAC
AAGGATGTGC ATGGAAAATT CGACGCGATT ATCTGCCTTG GCAATTCATT TACGCATCTT
TTCGAAGAAA AGGACCGGCG GCGGGCGCTG GCGGAGTTTT ATGCGGCGCT GAAGCATGAC
GGCATTCTCA TACTTGATCA GCGCAACTAT GACGCGATTC TGGATCACGG ATTCAGCTCC
AAACACAAAT ACTACTATTG CGGTGACAAG GTTACGGCTG AACCGGAGCA TGTCGATGAG
ACACTTGCCC GCTTCCGCTA CACGTTTCCG GACGACAGCG TCTATCACCT GAACATGTTT
CCTCTACGGA AGAATTACAC GCGGCGTCTC ATGCATGAAA TCGGGTTCCA GAAGGTGTCC
ACCTATGGAG ACTTCCAGGA CAAGTACAAG GACGAAGACA CCGATTTCTT TATTCACGTC
GCGGAGAAGA CCTACCATGA AGGCGAATAA
|
|---|
| Protein sequence | MKQLKREQEF GDDPLARRET DNYQNEYVES FVDKWDDLID WDSRAESEGH FFIDILKERG
KHKVLDVATG TGFNSVQLLK AGFDVTSVDG NAEMLSKAFA NARDHSFVMQ TVHADWRWLN
KDVHGKFDAI ICLGNSFTHL FEEKDRRRAL AEFYAALKHD GILILDQRNY DAILDHGFSS
KHKYYYCGDK VTAEPEHVDE TLARFRYTFP DDSVYHLNMF PLRKNYTRRL MHEIGFQKVS
TYGDFQDKYK DEDTDFFIHV AEKTYHEGE
|
|---|
| |