Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2676 |
Symbol | |
ID | 5454125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2875958 |
End bp | 2876686 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640878253 |
Product | HAD family hydrolase |
Protein accession | YP_001413941 |
Protein GI | 154253117 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.80155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCG GCGCGGGGCG AAAGCCGAGG GGCATCCTGT TCGACAAGGA TGGAACCTTG TTCGACTATC ACGGAACCTG GGGCCCGATC CTCGTCGAAG CGGCTGAAAT GGCCGCGCGT GAGCGGCGCG ACCTTGTGCC GGAGATGCTG TCGGTCATTG GCTTCGATCC GGCGACGGCG CGGGTCGCGG CGGGCAGCAT TGCCGGGGCG GGAGATACGT TCGGGCTGGT GGATGCGTGG ATCACGATTG CCGGCGGGTG GGAGAGGGCG GCGCTGATCG CGGCGCTGGA CGGGCTCTTC ATCCGGCTGG CGCCGGAGCG GTCGCTGCCG GTGACGGATC TGCCGGTGTT CTTCAGGGGG CTGAAGGACA GGGAGATCAG GACAGGCATT GCCACCAACG ATGTGGCGGA ATCGGCGCGG GCGACGATCC TGCGGTTCGG GCTTGAGACC TATATCGAAT TTTCGGCCGG GTATGACAGC GGGCATGGGC AGAAGCCGGG GCCGGGCATG GCGCTCGCCT TTTGCGCGGC GGTGGGGCTC GCGCCCCATG AGATTGCCGT GGTGGGGGAC AACAGCCATG ACCTCGAAAT GGGCCGAAGG GCGGGCGCGG CGCTCAATAT CGGCGTGCTG ACGGGGACTA GCGGGCGCGA CGATCTCGCG CCGCTTGCCG ATCACGTTAT CGGGAGCATT GCGGAACTGC CGGCGCTGCT GGACGAGCTG GGCGGCTAG
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Protein sequence | MAGGAGRKPR GILFDKDGTL FDYHGTWGPI LVEAAEMAAR ERRDLVPEML SVIGFDPATA RVAAGSIAGA GDTFGLVDAW ITIAGGWERA ALIAALDGLF IRLAPERSLP VTDLPVFFRG LKDREIRTGI ATNDVAESAR ATILRFGLET YIEFSAGYDS GHGQKPGPGM ALAFCAAVGL APHEIAVVGD NSHDLEMGRR AGAALNIGVL TGTSGRDDLA PLADHVIGSI AELPALLDEL GG
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