Gene Plav_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2539 
Symbol 
ID5455135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2741010 
End bp2741621 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content66% 
IMG OID640878116 
Productmethyltransferase type 11 
Protein accessionYP_001413805 
Protein GI154252981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0779638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.34629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA AAAACCACGA CACCAAAACC CTCGCCTTCT ACGACACGGA GGCCGAAGCC 
TATGCCGCGC GCGGCGACAG GACGGATGTG GGCTCGTTTC TCCACCCCTT CCTCGCCCGC
CTCGCACAAG GCGCGCACGT CCTCGACCTC GGCTCCGGCG ACGGCCGCCA CTCGGCGGCG
ATGATGGAAG CAGGCTTCGA GGTAACGCCC CTCGACGGCT CCGCCGGCCT CGCCGCCATC
GCCGCCCGCC GCCTCGGCAA ACCGGTGCGC ATCGCCCGCT TCGAGGAAAT CGACGACGTC
GCAGCCTTCG ACGCCATCTG GGCCCATGCC TCGCTGCTTC ACGTTCCCGT CGAAGGCATG
GCCGGCATCC TCGCCCGCCT CCACCGCGCC CTGAAACCCG GCGGTCTCCT CTTCGCGAGC
TTCAAGAGCG GCAACGCCGA AGGCCGCGAC GGCTTCGGCC GCTACTACAA TTATCCGTCC
AGGGATCAAT TATCCGCCTG GCTCACCGCG AGCGCCTCAT GGCACCAAAT CGAAATCAAG
GAAACCGCCG GCAGCGGCTA TGACGGCAAA CCGACGGATT GGCTGTTCGT TCAGGCCGTG
AAACCCAGCT AG
 
Protein sequence
MTEKNHDTKT LAFYDTEAEA YAARGDRTDV GSFLHPFLAR LAQGAHVLDL GSGDGRHSAA 
MMEAGFEVTP LDGSAGLAAI AARRLGKPVR IARFEEIDDV AAFDAIWAHA SLLHVPVEGM
AGILARLHRA LKPGGLLFAS FKSGNAEGRD GFGRYYNYPS RDQLSAWLTA SASWHQIEIK
ETAGSGYDGK PTDWLFVQAV KPS