Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2483 |
Symbol | |
ID | 5454657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2684825 |
End bp | 2685973 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640878059 |
Product | rod shape-determining protein RodA |
Protein accession | YP_001413749 |
Protein GI | 154252925 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.113844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGATT TGCGCCGCCT GACAGGGCAA GAGTTGCGGC TCAGCGAAAA GCTGGTCGAA TTCAACTGGG GCTTCCTGCT TCTTCTCGCG CTGATCGCGT CGATCGGCTT TGCGATGCTT TATTCGGTGG CCGATGGCAG CTTCACGCCC TGGGCCTTGC GTCAGGCGGC GCGTTTCGCC GCGGGCGCCT GCATCATGAT CGTCGTCGCA ATGATCGATT TGCGGCTTTG GATGAGGCTG GCCTATCCGC TTTACGGAAT GTCGCTGGCT CTGCTGATCG CGGTTGAAAT CATGGGCTTT ACGGGCATGG GCGCGCAGCG CTGGCTCGAT CTCGGCATCA TTCAGCTGCA GCCTTCGGAG ATCATGAAGG TGACGCTGGT GCTGGTGCTG GCGCGTTATT TTCACGGGCT GACGCTAGAT GAGGTTTCGC GTATCAGAAA TCTCTTGATC CCGCTGGCTC TGGTCGGAGC TCCCGTTGCG CTTGTCGTTC TGCAGCCCGA CCTGGGAACA GCTATCCTTT TGGTCGCCGC CGGAGCCATT ATCTTCTTCT CTGCGGGGCT GCGCTGGCGG TATTTCATTT TTGCCGGCGC GGGTGTCCTG GCAGCGATCC CCGTCATCTG GAGCCGGCTG CACGACTATC AGCGCAATCG CGTCTTCACG TTTCTCGACC CCGAAAGCGA TCCGCTCGGC ACCGGCTACC ACATCCTGCA ATCGAAGATC GCTCTCGGCT CGGGCGGCAT TTTCGGCAAG GGATTTATGG AAGGCACGCA GAGCCAGCTG AATTTCCTGC CGGAAAAGCA TACCGACTTC ATTTTCACGA TGCTGGGCGA GGAGCTCGGC CTGGTGGGCG GGCTGGCGCT CCTCACTCTT TATTTCATCG TGCTGATGTT CTCCTTCAAT GTCGCGCTCC AGTGCCGCAA CCAGTTCGGC CGCCTTCTCG CGATCGGCAT TTCGATGATG TTTTTCTTCT ATGTTTTCAT CAATACGGCG ATGGTGATGG GGCTTCTGCC GGTTGTGGGC GTGCCGCTCC CGCTCGTCTC TTATGGCGGC ACGTCGATGC TGTCGCTGAT GTTCGCCTTC GGGCTTTTGA TGAGCGTCTA TATCCACAGG AATCTGGAAA TTTCCAGGGG CCCCAGCGCC TTCTGGTGA
|
Protein sequence | MLDLRRLTGQ ELRLSEKLVE FNWGFLLLLA LIASIGFAML YSVADGSFTP WALRQAARFA AGACIMIVVA MIDLRLWMRL AYPLYGMSLA LLIAVEIMGF TGMGAQRWLD LGIIQLQPSE IMKVTLVLVL ARYFHGLTLD EVSRIRNLLI PLALVGAPVA LVVLQPDLGT AILLVAAGAI IFFSAGLRWR YFIFAGAGVL AAIPVIWSRL HDYQRNRVFT FLDPESDPLG TGYHILQSKI ALGSGGIFGK GFMEGTQSQL NFLPEKHTDF IFTMLGEELG LVGGLALLTL YFIVLMFSFN VALQCRNQFG RLLAIGISMM FFFYVFINTA MVMGLLPVVG VPLPLVSYGG TSMLSLMFAF GLLMSVYIHR NLEISRGPSA FW
|
| |