Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2430 |
Symbol | |
ID | 5453506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2626208 |
End bp | 2627083 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640878006 |
Product | DNA uptake lipoprotein |
Protein accession | YP_001413696 |
Protein GI | 154252872 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.233746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTTG CCCGAATGAG TGAGGCCAAC CTGCCCATCC GACGTCACAC AGGTTCATCG CTGCCGTATT TCCGCGCCGC CCTTGCGGGC GCGCTGGCGC TTGCGGTGGC CGGGCTGGCG GGGTGTTCCT CCGACGACGA GCTTCCCTAT GAAGAGCGGC CGGTCGAGCA GATCTACAAC AAGGCGATGG ACCACATGGC GGCGGGCGAC TACATCCCCG CGGCGAAGGA GTTCGACGAG GTCGAGCGCC AGCATCCCTA TTCGGAATGG GCGCGCCGCT CGATGCTGAT GAGCGCCTAT GCGCACTACA AGATCAACGA ATATGACGAG GCGATCCTCA GCGCGCAGCG TTTCATCTCG CTGCATCCGA GCAACAAGGA TGTGCCTTAC GCCTATTATC TGATCGGGCT GAGCTATTAC GAGCGGATTT CGGATGTGGG CCGCGACCAG AAGATGACCG AAAACGCGCT CAACTCGTTC TACGAACTGA CGCAGCGTTT CCCCTCCAGC GAATATTCGC GCGATGCGCG CCTGAAGATC GACCTCACGC TCGATCATCT CGCCGGCAAG GAAATGGAAA TCGGCCGCTA CTATCTCATT CGCCGCGACT ATGTTGCCGC CATCAACCGC TTCCGTGTCG TTATCGAAAA ATACCAGACG ACGACGCACA CGCCCGAAGC ACTGGAACGG CTGACGGAAG CCTATCTCGC GCTTGGTGTC AAAACCGAAG CGCAGACGGC GGCGGCGATC CTCGGCTACA ATTATCCCGG CAGCGACTGG TATGAAGACA GCTATGCGAT GCTGTCCAAC GAGGGACTGG AGCCGGTGGA GAACAAGGAT TCCTGGATCA GCAGGACATG GAACTCCGTT TTCTGA
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Protein sequence | MDFARMSEAN LPIRRHTGSS LPYFRAALAG ALALAVAGLA GCSSDDELPY EERPVEQIYN KAMDHMAAGD YIPAAKEFDE VERQHPYSEW ARRSMLMSAY AHYKINEYDE AILSAQRFIS LHPSNKDVPY AYYLIGLSYY ERISDVGRDQ KMTENALNSF YELTQRFPSS EYSRDARLKI DLTLDHLAGK EMEIGRYYLI RRDYVAAINR FRVVIEKYQT TTHTPEALER LTEAYLALGV KTEAQTAAAI LGYNYPGSDW YEDSYAMLSN EGLEPVENKD SWISRTWNSV F
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