| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2424 |
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| Symbol | |
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| ID | 5454049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2617626 |
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| End bp | 2618552 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878000 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001413690 |
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| Protein GI | 154252866 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.060178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAGG CAAAGCATGT CGCCGTTCTG AAAGGCGGAT GGAGCGCCGA GCGCGAGGTG
AGCCTCGTCT CCGGCAAGGG CTGTGCCGAG GCGCTGCGCA AGCATGGCTA CCGCGTGACC
GAGATCGATG CGGGGCGCGA TCTTGCCGAC CAGATATTGA AAGTGAAGCC GGACGTCGCT
TTCAACGCGC TGCATGGCCG CTGGGGCGAA GATGGCTGCG TCCAGGGGCT GCTTGAAATT
CTCCGCGTGC CTTACACGCA TTCGGGCGTG CTCGCCTCCG CGCTGGCGAT GCACAAGGAA
CGGGCGAAGT TCGTTTTCCG CGCCGCCGGT CTTCCGGTCG CCGAAAGCGT CGTGGTGCCG
CGCGAGCAGG CGGCGCATGG CCATGTGATG GACCCCCCCT ACGTCATCAA GCCGGTGAGC
GAAGGCTCCT CCGTCGGTGT CTTCATCGTG CGCGCGGGCG ACAACAGGCC GCCCGCCGAA
CTTACCTCGG CGGAATGGAA CCTCGGCGAC GAGGTGATGG CGGAACGCTA TATCGCGGGC
CGCGAACTTA CCTGCGCCGT GATGGGTGAG GAAATATTCG GCGTCACCGA AATCATCGCC
AATACGACTT TCTACGATTA CGAGGCGAAG TATCAGACCG GCGGTTCGCG CCACATCATC
CCGGCGCCCA TCGATGCAGA CATCTATGCC GAGGTGCAGC GCGTGACGCT GGCCGCGCAC
AAGGCGCTTG GCTGCCGGGG CGTTTCCCGC GCCGATTTCC GCTTCGACGA TACGCGGCCG
GGCAAGCCCG AACTCATTCT CCTCGAAGTG AACACGCAGC CGGGCATGAC GCCGACATCG
CTCGTGCCGG AGCTTGCCAA TCTCGCCGGC TATTCCTACG GCGAGCTGGT GAGCTGGATG
GTGGAGGAAG CATCATGCGA CAGGTGA
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| Protein sequence | MSQAKHVAVL KGGWSAEREV SLVSGKGCAE ALRKHGYRVT EIDAGRDLAD QILKVKPDVA
FNALHGRWGE DGCVQGLLEI LRVPYTHSGV LASALAMHKE RAKFVFRAAG LPVAESVVVP
REQAAHGHVM DPPYVIKPVS EGSSVGVFIV RAGDNRPPAE LTSAEWNLGD EVMAERYIAG
RELTCAVMGE EIFGVTEIIA NTTFYDYEAK YQTGGSRHII PAPIDADIYA EVQRVTLAAH
KALGCRGVSR ADFRFDDTRP GKPELILLEV NTQPGMTPTS LVPELANLAG YSYGELVSWM
VEEASCDR
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