Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2398 |
Symbol | |
ID | 5456168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2585525 |
End bp | 2586187 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640877973 |
Product | toluene tolerance family protein |
Protein accession | YP_001413664 |
Protein GI | 154252840 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.038241 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACGA CACGGATTGC CCTGCGAACG CTGGTCGCAC CGCTCGCAAT TTGCGTGGCG CTCATGACCA GCGCCGCCCA TGCGCAAGCA TCGACGGATC AGGCCGCAGT GAGCTTCGTG GAAGATGTCT CGACACGCGC CATCGACATC ATCAGCGACA AGTCCGCCTC GAAGGCGGAA CGGGAAAAGG CGTTCCAGCA GCTGCTTAAT GAAACGGCCG ACATGCAGCG CATCGCCGCC TTCGCGCTCG GCCAGTACCT GCGCACACCG ACGGAAGAGC AGAAGAACGA ATATCTGAAG CTCGTCGAGA CATTCATCGT GAAGGTCTAT GTGACGCGCC TCTCCGACTA CAATAATGAA AAGCTCGACG TGCTCAGCGC GAAGGCCAAG GGCGACACCC AGGCGATCGT GCAGAGCGAG ATCAAGTTCA CCAATGGCCG CGAACCCGTC AAGGTCGACT GGTGGCTTGT GAAGAATGGT AGCGACTTCA AAATCTTCGA CGTGAACGTC GTCGGCATCT GGCTGGCGCA GGAGCAGCGC TCTACCTTCA CCACCGTCAT TCGCAACAAT GGCGGCAATT TCGAAGCCCT GCTGGAGCAT CTGCGCTCGC AGATCGCCAA GGCGGAAACG GGCGATATTT CGGGCATCAG CGCAGCGAAC TGA
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Protein sequence | MFTTRIALRT LVAPLAICVA LMTSAAHAQA STDQAAVSFV EDVSTRAIDI ISDKSASKAE REKAFQQLLN ETADMQRIAA FALGQYLRTP TEEQKNEYLK LVETFIVKVY VTRLSDYNNE KLDVLSAKAK GDTQAIVQSE IKFTNGREPV KVDWWLVKNG SDFKIFDVNV VGIWLAQEQR STFTTVIRNN GGNFEALLEH LRSQIAKAET GDISGISAAN
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