| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2339 |
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| Symbol | |
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| ID | 5454623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2517277 |
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| End bp | 2517909 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640877917 |
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| Product | integrase family protein |
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| Protein accession | YP_001413608 |
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| Protein GI | 154252784 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0020288 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCACCT CACCTGCCAA TGCTCCCATC TATAGACCGA ATCCCTGGAA TAAGGGGCGC
TTGGTGGGAC AGAAGCGTCC TCTGGCCCCG AAACACGTAT GGTCGATCAG AATTCGACTC
GAAATGGCTG ATGACCGACG TGGTCTTGCC CTGTTCAATT TGGCAATTGA TAGCAAGCTT
AGAGCTTGTG ATCTGGTTGC TTTGAAGGTG AACGACGTCT TCGTCGGTGG GCAGCCTCGC
CAGCGCGCTA CCGTTGTTCA GCGAAAGACT GGCCGGCCAG TTCAGTTCGA AATTACAGAC
ACCACCCGTG CCGCACTTGA GGGGTGGCTT CATCATCCCG CTATGTCTTC GGCCGAATTT
CTATTTCCGT CCCGGGTGCA TAGCGCATGC CACATCTCAA CGCGTCAGTA TGCGCGCATC
GTCAATACGT GGATTGCTTC CGTCGGCCTA GATCCGTCTG GATACGGAAC GCACTCGATG
CGGAGAACCA AGGCGGCTCA GATATATCGC AAGACAGGAA ATTTGAGAGC GGTTCAGCTG
CTTCTTGGCC ACACGAAGTT GGAAAGCACT GTCCGATACT TAGGTATCGA GGTTGATGAT
GCGCTTAAAA TTGCGGAGTC AATTGAGCTA TGA
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| Protein sequence | MSTSPANAPI YRPNPWNKGR LVGQKRPLAP KHVWSIRIRL EMADDRRGLA LFNLAIDSKL
RACDLVALKV NDVFVGGQPR QRATVVQRKT GRPVQFEITD TTRAALEGWL HHPAMSSAEF
LFPSRVHSAC HISTRQYARI VNTWIASVGL DPSGYGTHSM RRTKAAQIYR KTGNLRAVQL
LLGHTKLEST VRYLGIEVDD ALKIAESIEL
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