Gene Plav_2251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2251 
Symbol 
ID5454473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2423981 
End bp2424418 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content63% 
IMG OID640877830 
ProductMarR family transcriptional regulator 
Protein accessionYP_001413522 
Protein GI154252698 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.344689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.255238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGT CCGACAATCC CCTTCTCCTC GAGAACCAGC TCTGCTTTGC GCTTTATTCC 
TCGTCGCTGC TGATGACGAA GCTCTACAAG CCGCTGCTGG CGGAAATCGG GCTGACCTAT
CCGCAATATC TCGCCATGCT GGCCTTGTGG GAGGAGGACG GCGTGACTGT GGGCGCGCTG
GGGGAGCGGC TTTATCTCGA TTCCGGCACG CTGACGCCGC TGCTGAAGCG GCTGGAGACG
GCGGGGCTTT TGAGCCGGGA GCGGAACGAA GCGGATGAGC GCCAGGTGCT GGTGCGGCTT
ACCGGTGCCG GCAGGGCGCT GAAGCGGCAG GCGGCGGGCA TCCCGAAAAA GGTTGCGGTT
GCGGCGGGAA TGCCTCTCGC CGAGATCGTC AACCTGCGGA AAAGACTGAC AAATTTGCGC
GATACGCTGG CGGAGTGA
 
Protein sequence
MAKSDNPLLL ENQLCFALYS SSLLMTKLYK PLLAEIGLTY PQYLAMLALW EEDGVTVGAL 
GERLYLDSGT LTPLLKRLET AGLLSRERNE ADERQVLVRL TGAGRALKRQ AAGIPKKVAV
AAGMPLAEIV NLRKRLTNLR DTLAE