| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2132 |
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| Symbol | |
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| ID | 5453364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2314027 |
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| End bp | 2314875 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877709 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001413403 |
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| Protein GI | 154252579 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00687] pyridoxal kinase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.588203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTTCTC TTCCTCAGGG CCGCGTATTG ATCGTGGCGG GTTCCGATTC AGGCGGCGGC
GCAGGCATCC AGGCCGACAT CAAAAGCGTC TCCGCCATGG GCGGCTTTGC CATGACCGCC
GTCACTGCGA TCACGGTTCA GAATACACTC GGCGTTCACG GCATTCATGA AGTGCCGGTG
GATGTTGTCG TAGCGCAGAT GAAAGCGGTG ATGGAGGATA TCGGCGCCGA CGCCGTGAAG
ACCGGTATGT TGCACAGCGC GGAAATCGTC GAAGCCGTTG CCGCACAGCT CTCCGAGGAA
AACGCGCCGG GCTTTCTCGT CGTCGATCCC GTCATGATCG CGAAAGGCGG CGCCGCGCTT
CTTGAAGGGT CGGCTGTTGC GGCGCTCAAG GAAGTGCTGA TCCCGCTCGC CACGCTCATA
ACGCCCAATG TGCCGGAAGC CGAAGTTCTC ACCGGTCGCA GCATCACCGA TCTTGCAAGC
CAGAAGGCGG CGGCGGATGC GCTTCTCGGT CTCGGCTGCG ATGCCGTGCT GCTCAAAGGC
GGGCATCTTT CCGGCGACAC ATTGTTCGAC GTACTGGCGA CGCAGGAAAC GGTCCACACC
TTCTCCTCGC CCCGCATAGA CACGCGGCAC ACGCATGGCA CGGGCTGCGC TCTTGCTTCG
GCGATCGCTG CGCTTCTGGC CCAGGGCGTG GAGCTGACGG CGGCGGTCGA GGCTGCGCGC
GACTACATTC ACGAAGCCAT CCGCACCGCA CCGGGCTTCG GCAAAGGGCA CGGCCCGTTG
AATTTTCTCG CGGCTATGGA TGACGCCGTC GCGATTGACG AAGACGATGA GCCGGTCTCA
CGCCACTAG
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| Protein sequence | MISLPQGRVL IVAGSDSGGG AGIQADIKSV SAMGGFAMTA VTAITVQNTL GVHGIHEVPV
DVVVAQMKAV MEDIGADAVK TGMLHSAEIV EAVAAQLSEE NAPGFLVVDP VMIAKGGAAL
LEGSAVAALK EVLIPLATLI TPNVPEAEVL TGRSITDLAS QKAAADALLG LGCDAVLLKG
GHLSGDTLFD VLATQETVHT FSSPRIDTRH THGTGCALAS AIAALLAQGV ELTAAVEAAR
DYIHEAIRTA PGFGKGHGPL NFLAAMDDAV AIDEDDEPVS RH
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