| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2119 |
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| Symbol | |
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| ID | 5455364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2300340 |
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| End bp | 2301065 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640877696 |
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| Product | Tol-Pal system TolQ |
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| Protein accession | YP_001413390 |
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| Protein GI | 154252566 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein
[TIGR02797] tonB-system energizer ExbB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.145493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.278172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCCCG TCACCACTAC ACAGGTGATT ACAGAAACCA CGGTTGACGC CGTCCCGCTG
GATTTTTCCA TGTGGGGCTT GTTTCTGCGC GCCGACCTTG TCGTCAAGCT GGTCATGTTG
GGGTTGCTCT TCGCCTCCGT CTGGTCTTGG GCGATTATTT TCGACAAATG GTGGCGTTTC
GCGCGCGTTG AGCGCCGCGC CGACCAGTTT GAACGGATTT TCTGGTCGGG CCGGTCGCTT
GATGAGCTCT ATCAGGAAAT GGGCCATCGC CCGCAGCATC CGCTATCCGC GCTCTTTATC
GCCGCGATGC GGGAATGGCG CCGCTCGCAG GATGTCGTGG CAAGTTCCTT TGTCGGGCTC
AAGGAGCGGG TGGACAAGGT GATGCAGGTC ACGATCAGCC GGGAAATGAT GAACCTCGAA
AGCAGGCTTC TCTTTCTGGC GACGGTCGGA TCGGTGGCAC CCTTCATCGG CCTGTTCGGT
ACGGTCTGGG GCATCATGAA TTCCTTCCAG TCGATTGCGA TCAGCCGCGA CACAAATCTC
GCGGTGGTCG CACCGGGCAT CGCGGAAGCA CTGTTCGCGA CAGCTCTCGG TCTCGTTGCC
GCTATTCCCG CCGTCGTCGC CTATAACCGC TTCTCCAATC AGTCGTCGCG GATCGGTCAG
CGCATGGAGA GCTTCGCGGA TGAATTCTCC GCGATCCTCT CACGGCAGCT CGACGAGAGA
GGCTGA
|
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| Protein sequence | MDPVTTTQVI TETTVDAVPL DFSMWGLFLR ADLVVKLVML GLLFASVWSW AIIFDKWWRF
ARVERRADQF ERIFWSGRSL DELYQEMGHR PQHPLSALFI AAMREWRRSQ DVVASSFVGL
KERVDKVMQV TISREMMNLE SRLLFLATVG SVAPFIGLFG TVWGIMNSFQ SIAISRDTNL
AVVAPGIAEA LFATALGLVA AIPAVVAYNR FSNQSSRIGQ RMESFADEFS AILSRQLDER
G
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