| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2117 |
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| Symbol | ruvB |
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| ID | 5454486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2298569 |
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| End bp | 2299627 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877694 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_001413388 |
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| Protein GI | 154252564 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.302913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.384387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATC GCATCGTCGG GGCGGCGAAG CGCGAGGAAG ACGAACTGGA GCGCTCGCTG
CGGCCGCAGG TTCTTTCCGA CTTCGTTGGC CAAGCCCGCG CCAGGGAAAA TCTTGCGGTC
TTTATCGAAG CCGCGCGGAC CAGGGCGGAG GCGCTCGATC ATGTGCTGTT TGCCGGTCCG
CCCGGCCTCG GCAAAACAAC GCTGGCACAG ATCGTTGCGC GGGAACTTGG CGTCAACTTC
CGGGCGACTT CCGGGCCGGT AATCTCAAAG GCTGGCGATC TTGCGGCTCT GCTCACAAAT
CTAGAGCCGC GCGACGTGCT CTTCATCGAC GAAATTCATC GTCTCTCTCC GGCGGTCGAG
GAAATTCTTT ATCCGGCAAT GGAAGATTTT CAGCTCGATC TCATCATCGG CGAGGGGCCG
GGAGCGCGGT CCGTCCGGAT CGAACTGGCG CCGTTCACAC TGATCGGCGC CACGACACGC
ACAGGTCTTC TCACGACACC TTTGCGCGAC CGCTTTGGCA TTCCGGTGCG CCTCCATTTC
TATGAAGTAG CAGAGCTGGA AGGCATCGTG CGGCGTGGAG CAAGTGTACT TGGCGTTGCG
ATGACACCGG ATGGCGCACA CGAAATTGCG CGCCGGGCGC GGGGCACACC GCGTGTCGCC
GGAAGGCTTC TTCGCCGCGT GCGCGACTTT GCATCTGTCG AAGGTGTGAA GTCGATCGAT
GCAAAGGCGG CGGACAAGGC GTTGCAACGG TTGGAAGTTG ACGAGCTCGG CCTCGATGCG
CTGGATCATC GCTATCTGCG CTGCATCGCT GTCAGCTTTT CCGGGGGGCC GGTTGGAGTG
GAAACAATTG CCGCCTCGCT TTCGGAACCG CGAGATGCAA TCGAGGAGAT CATCGAGCCC
TATCTTATTC AGCAGGGTCT CGTAAACCGT ACGCCGCGAG GGCGGACGCT GACACCGGCT
GCCTTTGCGC ATATCGGCGT TGCCCTACCT GCCGGGCGGT CAGGCGAGCC GGGGCAGGCC
CGGTTGTTCG ATGGCGATGA GGAGAATGGG TCGGCATGA
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| Protein sequence | MTDRIVGAAK REEDELERSL RPQVLSDFVG QARARENLAV FIEAARTRAE ALDHVLFAGP
PGLGKTTLAQ IVARELGVNF RATSGPVISK AGDLAALLTN LEPRDVLFID EIHRLSPAVE
EILYPAMEDF QLDLIIGEGP GARSVRIELA PFTLIGATTR TGLLTTPLRD RFGIPVRLHF
YEVAELEGIV RRGASVLGVA MTPDGAHEIA RRARGTPRVA GRLLRRVRDF ASVEGVKSID
AKAADKALQR LEVDELGLDA LDHRYLRCIA VSFSGGPVGV ETIAASLSEP RDAIEEIIEP
YLIQQGLVNR TPRGRTLTPA AFAHIGVALP AGRSGEPGQA RLFDGDEENG SA
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