| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2102 |
|---|
| Symbol | |
|---|
| ID | 5456829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2284677 |
|---|
| End bp | 2285240 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640877679 |
|---|
| Product | elongation factor P |
|---|
| Protein accession | YP_001413373 |
|---|
| Protein GI | 154252549 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00038] translation elongation factor P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0533599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.00367804 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA ACGGCAACGA AATCCGTCCC GGCAATGTTA TCGAGCATGA GGGCGGCCTT
TGGGCGGCAG TCAAAGTGCA GCATGTGAAG CCCGGAAAGG GCGGCGCCTT TGCGCAAGTG
GAACTGAAGA ACCTGGTCGA TGGCCGCAAG CTGAACGAAC GCTTCCGTTC CGCCGAAACC
GTGGAGCGCG TGCGCCTCGA GCAGAAGGAC TATCAGTATC TCTACGAGAA TGACGGGATG
CTGACCTTCA TGGACAATGA GACCTACGAG CAGATCGAAC TCTCGAGGGA ATGGGTCGGC
GACCGCGCCG CCTTCCTGCA GGACGGCATG AAGGTGACGG TTGAAAGCCA CGAGGGCAAG
GCGCTGGGCA TTTCGCTTCC CGACCAGGTT GTGCTCGAAA TCACCGAAAC CGAGCCGACC
GTAAAAGGCC AGACCGCGAC TAGCTCCTAC AAGCCCGCGC TCCTTGAAAA TGGCGTACGC
GTCATGGTGC CCCCTTTCAT CACCACCGGC GAACGGATCG TGGTCGACAC GAACGAAGTC
ACCTATCTTC GCCGCGCCGA CTGA
|
|---|
| Protein sequence | MKINGNEIRP GNVIEHEGGL WAAVKVQHVK PGKGGAFAQV ELKNLVDGRK LNERFRSAET
VERVRLEQKD YQYLYENDGM LTFMDNETYE QIELSREWVG DRAAFLQDGM KVTVESHEGK
ALGISLPDQV VLEITETEPT VKGQTATSSY KPALLENGVR VMVPPFITTG ERIVVDTNEV
TYLRRAD
|
|---|
| |