Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1998 |
Symbol | |
ID | 5455292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2182658 |
End bp | 2183020 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640877574 |
Product | response regulator receiver protein |
Protein accession | YP_001413269 |
Protein GI | 154252445 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000230643 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGTA TTCTCCTTGC TGAAGATGAT GAATCCATGC GCCGTTTTCT GTCCAAGGCG CTGGAAAACG CCGGCCATGA GGTCGTTTCC TTCGGCAAGG GCGATGAGGC CCATGGCCGT CTGAAACAGG ATATTTTCGA CATTCTGCTC ACAGATATCG TCATGCCGGA GATGGATGGC ATCGAATTGG CCCGGCTGGC GGCCGAACTC GACCCTACCC TCAAGATCAT GTTCATCACG GGTTTTGCGG CGGTGGCGCT AAACCCGGAA GTGGCGGCGC CCCGCGATGC GAAGGTGCTG TCGAAGCCTT TCCACCTGCG CGATCTGGTG GCCGAGGTCG ACCGGCTGAT GGCGGCTGCC TGA
|
Protein sequence | MARILLAEDD ESMRRFLSKA LENAGHEVVS FGKGDEAHGR LKQDIFDILL TDIVMPEMDG IELARLAAEL DPTLKIMFIT GFAAVALNPE VAAPRDAKVL SKPFHLRDLV AEVDRLMAAA
|
| |