Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1910 |
Symbol | |
ID | 5454969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2078119 |
End bp | 2079681 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640877487 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001413182 |
Protein GI | 154252358 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCTTCG ATGATGGCGA GCGGCCGGGT GCCGGAAAGG AAACCGGCGG CGCCGAGCCC GCCCGGCACA AGCCGGGCAC CCTTGTGCAG AAATCATTGA CGGGTGCCTT CTGGACCTTC GGCGGCTCCG TCGTCCAGGC GGTCATGAAG ATGCTGGTCC TCGCCGTTCT GGCGCGCCTG CTGACACCGC ATGATTTCGG CGTGGTCGGC GCGGCGATGG TCGTGGTCGG CCTGCTCAAC ATATTCACGC AGCTCGGCGT CGGCCCGGCC ATTGTCCAGC GGGTGGATTT GACCGACACG CATATAAAGA CCGGCCAGAC GCTCTCTCTC GCCATGGGTT TCATCACCGG CGCCATCTTC TATTTCTCGG CGCCCGCCAT CGAAGGCTTC TTCCGCATCG ACGGGGTTGC CGATGTGGTC CGCGTGCTGG CTTTCGTTTT TCCGCTGAAG GGCATGGCGA TCGTCGCAGA GGGCCTTCTC CAGCGCAACA TGCGCTTCCG CGACATGGCC GCCGTTGAAT CCGCCAGCTA TATTTTCGGC TATGCGCCGG CGGCCATCGT GCTTGCCGCG CTCGGCTGGG GGGCGGAGGC GCTTGCCATC GGCCTTCTGG CGCAGGCATT CCTGCTGCGC GTCGCCTATC GCTTTCTGGT CCGGCAGAAA TTTTCGCTGG CGCTGGATAG CGGCGCGATG AAGCAATTGC TGAATTATGG CGGCGGCCAC ACGCTGGCGC GGCTCGGCAA TTTCTCCGCC CTCAATGCGG ATAATCTGGT CGTCGGCCGC TGGCTGGGGG CAGAGGCGCT CGGCATCTAT GCGCGCTCCT ATCAACTTAT CATGCAGCCT GCCAATCTTT TCGGCACCGT GGTCGACAAG GTGCTCTTCC CGGCCATGGC GAGCGTGCAG GATGACAAGG AGCGCCTCGC CCGCGCCTAT GAGCGGCTTA CCGGCGTCGT GGCGATGATA ACCCTGCCAT TGAGCTTTGT GCTGATCGTC CTCGCGGATG AACTGATCCT CACGGTTCTC GGCGGGCAGT GGGGCGGCGT CGTCCTGCCG TTCCAGATTC TGGTTGTCAC GCTGGTTTTC CGCACGGCCT ACAAATTGGG GGACTCCTTG TGGCGTGCGG TAGGGGCGAC TTATCGCGGA GCGGCTCGTC AGTGGACATA TGCTGCCGCA GTGCTAGCCG GGGCGGCGTT TGGGCAGTTT TGGGGCATAT CCGGCGTGGC CACTGGTGTA GGAATTGCAA TTGCGGTGAA CTTCTGGCTT ACGCTGCTGA TGTGTCGCAA GCTGATTAAT ATATCGCTCA AGAAGATCGG TGGGGCCTTG TTGCGTCATT TCGCCATCGC CCTTGCGGTG GGGGGTATAG CGCTGGCAGG CAAGCTTGCA ATGTTGGAGT TTGGAGTTTC GGGGCCCGTC ATACTGGTTG TAACCGGAGC CCTTTTGGCG GTATGCGCAA TGTTGGCGTA TCGTTTTTTA ATAAGCATCT TCGGTGCCGA GGGCGAGTGG CTCAGAGATG TTGTTGTCGA AAAAATAAGT AAGAGAAAAC GCTCCAGGAC ATTTGGGCGG TAG
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Protein sequence | MSFDDGERPG AGKETGGAEP ARHKPGTLVQ KSLTGAFWTF GGSVVQAVMK MLVLAVLARL LTPHDFGVVG AAMVVVGLLN IFTQLGVGPA IVQRVDLTDT HIKTGQTLSL AMGFITGAIF YFSAPAIEGF FRIDGVADVV RVLAFVFPLK GMAIVAEGLL QRNMRFRDMA AVESASYIFG YAPAAIVLAA LGWGAEALAI GLLAQAFLLR VAYRFLVRQK FSLALDSGAM KQLLNYGGGH TLARLGNFSA LNADNLVVGR WLGAEALGIY ARSYQLIMQP ANLFGTVVDK VLFPAMASVQ DDKERLARAY ERLTGVVAMI TLPLSFVLIV LADELILTVL GGQWGGVVLP FQILVVTLVF RTAYKLGDSL WRAVGATYRG AARQWTYAAA VLAGAAFGQF WGISGVATGV GIAIAVNFWL TLLMCRKLIN ISLKKIGGAL LRHFAIALAV GGIALAGKLA MLEFGVSGPV ILVVTGALLA VCAMLAYRFL ISIFGAEGEW LRDVVVEKIS KRKRSRTFGR
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