Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1873 |
Symbol | |
ID | 5454316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2034799 |
End bp | 2035893 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640877451 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001413146 |
Protein GI | 154252322 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.25852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCG GATTGTCGGA AGACCAGAAG CTGCTTCAGG AAAGCGTCGG GCGGACACTG GAGAAGGTGT CGTCTCTCGA CCGGGTGCGG AAGGCGGCGG AGACGCGCGA GGATTATGCC CGCGACGTGT GGACGGCGCT TGTCGAGCTT GGCGTTCCCG GCATGATGGT GCCGGAAGAT TTCGGTGGCA TGGGCATGAA GCTGCTCGAC GCGGCGCTGG TGGCGGAAAT GCTCGGGCGG CACATTGCGC CGGTGCCTTT CGTTGCGACC GCGGTAATGG CGCCCATCGC GCTTACCGGC GCGGGAAGCG CGACGCAGCA GGAAGCGTGG CTACCGAAGC TTGCCGGCGG TGAGGCGATT GCGGGCGTGG CGGTGGCGGA GCGCGCGGCG GGCGCGCGCG ACGGCGCGGG CGTGACGGCG GCGGGCGGCA AGCTCAGCGG GAGCGCGCTC TTCGCGATGG ACGCGACAGG CGCCGACATT CTGATCGTTG CGGACAAGGC GGGCGGGCTT CATCTCGTCA AGGGCGACGC AAAGGGGCTG ACCAAGGTTG CGTTGACCAG CATCGACCTT ACGCGCTCGC TGACGGAATT GCAGTTTGAG GCGGTGGAGG CGGAGGCGCT GACGGCAGGC GATGCGGGCG CGACGCTTAC GCGGATGATC GATGCGGGGC GCGTGATGCT GGCGGCGGAC ACGCTGGGCG CGGGCTGGGC GATGATCGAC AAGGCGGTGG CCTATGCAGC GGAGCGCAAG CAGTTCGGCC GGGTGATCGG CTCGTTCCAG GCGGTGAAGC ATATGTGCGC GGAGATGGCG TCGGAGCTTG AGCCGTGCCG TTCGCTCATC TGGTATGCGG GCCATGCCTT TGACGAGGTG CCGGAAGAGT CGAGCCTGAT GGCGGCACAT GCGAAATCGC TGACGACGGA GGTGGGCCGC TTCGTCGCCC GCACCGCGAC GGAGGTGCAT GGCGGCATGG GCTTTACCGA TCTCGTGGGG CTTCACTACT GGTTCAAGCG GATCGGTCTC GACCGGCAGT TGCTGGGGAG CCCGGAGCGG GTGCGCGGCG AGGCGGCGAA GATGCAGGGC TGGGCGGCGG ATTAA
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Protein sequence | MEFGLSEDQK LLQESVGRTL EKVSSLDRVR KAAETREDYA RDVWTALVEL GVPGMMVPED FGGMGMKLLD AALVAEMLGR HIAPVPFVAT AVMAPIALTG AGSATQQEAW LPKLAGGEAI AGVAVAERAA GARDGAGVTA AGGKLSGSAL FAMDATGADI LIVADKAGGL HLVKGDAKGL TKVALTSIDL TRSLTELQFE AVEAEALTAG DAGATLTRMI DAGRVMLAAD TLGAGWAMID KAVAYAAERK QFGRVIGSFQ AVKHMCAEMA SELEPCRSLI WYAGHAFDEV PEESSLMAAH AKSLTTEVGR FVARTATEVH GGMGFTDLVG LHYWFKRIGL DRQLLGSPER VRGEAAKMQG WAAD
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