More than 300 homologs were found in PanDaTox collection
for query gene Plav_1873 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_1873  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
364 aa  720    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.25852 
 
 
-
 
NC_009719  Plav_1806  acyl-CoA dehydrogenase domain-containing protein  66.39 
 
 
361 aa  473  1e-132  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.133917  normal 
 
 
-
 
NC_010333  Caul_5299  acyl-CoA dehydrogenase domain-containing protein  62.26 
 
 
362 aa  428  1e-119  Caulobacter sp. K31  Bacteria  normal  0.797236  normal  0.678656 
 
 
-
 
NC_007958  RPD_3606  acyl-CoA dehydrogenase-like  37.75 
 
 
375 aa  195  9e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.343356  normal 
 
 
-
 
NC_007778  RPB_1687  Acyl-CoA dehydrogenase-like  35.9 
 
 
375 aa  193  5e-48  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.473002  normal  0.801014 
 
 
-
 
NC_009485  BBta_7118  putative acyl-CoA dehydrogenase  35.73 
 
 
375 aa  189  7e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.695854 
 
 
-
 
NC_007958  RPD_4383  acyl-CoA dehydrogenase-like  34.25 
 
 
379 aa  186  4e-46  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1908  acyl-CoA dehydrogenase domain protein  36.02 
 
 
375 aa  186  5e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.195445  n/a   
 
 
-
 
NC_009719  Plav_0964  acyl-CoA dehydrogenase domain-containing protein  35.65 
 
 
375 aa  186  8e-46  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.367586  normal 
 
 
-
 
NC_008048  Sala_3078  acyl-CoA dehydrogenase-like protein  35.19 
 
 
372 aa  183  4.0000000000000006e-45  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4674  Acyl-CoA dehydrogenase-like  33.15 
 
 
379 aa  181  2.9999999999999997e-44  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_1653  acyl-CoA dehydrogenase domain-containing protein  32.19 
 
 
379 aa  178  2e-43  Maricaulis maris MCS10  Bacteria  normal  normal  0.257956 
 
 
-
 
NC_009511  Swit_3632  acyl-CoA dehydrogenase domain-containing protein  37.12 
 
 
354 aa  177  4e-43  Sphingomonas wittichii RW1  Bacteria  normal  0.876605  normal  0.772709 
 
 
-
 
NC_007953  Bxe_C0702  putative acyl-CoA dehydrogenase  34.99 
 
 
384 aa  176  5e-43  Burkholderia xenovorans LB400  Bacteria  normal  0.307402  normal  0.791276 
 
 
-
 
NC_007925  RPC_2197  acyl-CoA dehydrogenase-like  34.29 
 
 
375 aa  176  6e-43  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0703  putative acyl-CoA dehydrogenase  32.81 
 
 
379 aa  176  6e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1031  acyl-CoA dehydrogenase domain-containing protein  34.56 
 
 
371 aa  174  1.9999999999999998e-42  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.818052  normal 
 
 
-
 
NC_008048  Sala_1633  acyl-CoA dehydrogenase-like protein  37.39 
 
 
363 aa  172  5.999999999999999e-42  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0193682  normal  0.810122 
 
 
-
 
NC_013510  Tcur_1878  acyl-CoA dehydrogenase domain protein  37.57 
 
 
369 aa  171  2e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0940842  n/a   
 
 
-
 
NC_011004  Rpal_5284  acyl-CoA dehydrogenase domain protein  32.88 
 
 
379 aa  170  3e-41  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.245175  n/a   
 
 
-
 
NC_007348  Reut_B3534  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  33.61 
 
 
377 aa  169  6e-41  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3761  acyl-CoA dehydrogenase domain-containing protein  34.35 
 
 
351 aa  169  1e-40  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.637859  n/a   
 
 
-
 
NC_009511  Swit_1603  acyl-CoA dehydrogenase domain-containing protein  33.61 
 
 
372 aa  167  2.9999999999999998e-40  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5573  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
392 aa  166  5e-40  Frankia sp. EAN1pec  Bacteria  normal  0.33081  normal 
 
 
-
 
NC_009719  Plav_2204  acyl-CoA dehydrogenase domain-containing protein  31.23 
 
 
379 aa  164  3e-39  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0189633  normal 
 
 
-
 
NC_009565  TBFG_11962  acyl-CoA dehydrogenase fadE18  35.28 
 
 
363 aa  160  2e-38  Mycobacterium tuberculosis F11  Bacteria  normal  0.618058  normal  0.535978 
 
 
-
 
NC_007333  Tfu_2310  putative acyl-CoA dehydrogenase  38.08 
 
 
377 aa  160  4e-38  Thermobifida fusca YX  Bacteria  normal  0.858496  n/a   
 
 
-
 
NC_007347  Reut_A0979  Acyl-CoA dehydrogenase, C-terminal  34.08 
 
 
372 aa  159  6e-38  Ralstonia eutropha JMP134  Bacteria  normal  0.525022  n/a   
 
 
-
 
NC_010338  Caul_3427  acyl-CoA dehydrogenase domain-containing protein  34.08 
 
 
371 aa  159  1e-37  Caulobacter sp. K31  Bacteria  normal  0.143009  normal  0.517094 
 
 
-
 
NC_008726  Mvan_4007  acyl-CoA dehydrogenase domain-containing protein  34.55 
 
 
365 aa  158  1e-37  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0926  acyl-CoA dehydrogenase domain protein  34.97 
 
 
373 aa  158  1e-37  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5375  acyl-CoA dehydrogenase domain-containing protein  34.67 
 
 
371 aa  157  2e-37  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.932772 
 
 
-
 
NC_013510  Tcur_3998  acyl-CoA dehydrogenase domain protein  33.88 
 
 
734 aa  155  7e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0183743  n/a   
 
 
-
 
NC_012791  Vapar_1273  acyl-CoA dehydrogenase domain protein  33.15 
 
 
371 aa  155  1e-36  Variovorax paradoxus S110  Bacteria  normal  0.592297  n/a   
 
 
-
 
NC_007778  RPB_1750  Acyl-CoA dehydrogenase-like  31.62 
 
 
380 aa  154  2e-36  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0168825 
 
 
-
 
NC_008048  Sala_0855  acyl-CoA dehydrogenase-like protein  34.97 
 
 
330 aa  154  2e-36  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0345  acyl-CoA dehydrogenase domain-containing protein  34.69 
 
 
389 aa  151  1e-35  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1445  acyl-CoA dehydrogenase domain-containing protein  32.01 
 
 
377 aa  151  2e-35  Caulobacter sp. K31  Bacteria  normal  0.837233  normal  0.259915 
 
 
-
 
NC_010512  Bcenmc03_6833  acyl-CoA dehydrogenase domain-containing protein  32.58 
 
 
386 aa  150  3e-35  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.508275  normal 
 
 
-
 
NC_009077  Mjls_5570  acyl-CoA dehydrogenase domain-containing protein  33.43 
 
 
385 aa  150  3e-35  Mycobacterium sp. JLS  Bacteria  normal  0.0891076  normal 
 
 
-
 
NC_008705  Mkms_5278  acyl-CoA dehydrogenase domain-containing protein  33.43 
 
 
385 aa  149  5e-35  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3549  acyl-CoA dehydrogenase-like  31.81 
 
 
380 aa  149  5e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5189  acyl-CoA dehydrogenase-like protein  33.43 
 
 
385 aa  149  5e-35  Mycobacterium sp. MCS  Bacteria  normal  0.454654  n/a   
 
 
-
 
NC_009077  Mjls_5654  acyl-CoA dehydrogenase domain-containing protein  32.12 
 
 
385 aa  148  1.0000000000000001e-34  Mycobacterium sp. JLS  Bacteria  normal  0.693772  normal 
 
 
-
 
NC_007973  Rmet_0945  acyl-CoA dehydrogenase-like protein  32.53 
 
 
372 aa  148  1.0000000000000001e-34  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1000  acyl-CoA dehydrogenase-like  30.66 
 
 
379 aa  147  3e-34  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.933298  n/a   
 
 
-
 
NC_008146  Mmcs_5275  acyl-CoA dehydrogenase-like protein  32.12 
 
 
385 aa  147  3e-34  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5364  acyl-CoA dehydrogenase domain-containing protein  32.12 
 
 
385 aa  147  3e-34  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2105  acyl-CoA dehydrogenase domain-containing protein  33.62 
 
 
371 aa  147  3e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3846  acyl-CoA dehydrogenase-like  31.79 
 
 
371 aa  146  6e-34  Polaromonas sp. JS666  Bacteria  normal  normal  0.94503 
 
 
-
 
NC_009338  Mflv_2335  acyl-CoA dehydrogenase domain-containing protein  34.6 
 
 
363 aa  146  6e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.607114 
 
 
-
 
NC_007974  Rmet_4575  acyl-CoA dehydrogenase-like protein  29.77 
 
 
379 aa  146  7.0000000000000006e-34  Cupriavidus metallidurans CH34  Bacteria  normal  0.0903077  normal  0.010992 
 
 
-
 
NC_007348  Reut_B4558  Acyl-CoA dehydrogenase, C-terminal  31.69 
 
 
360 aa  145  1e-33  Ralstonia eutropha JMP134  Bacteria  normal  0.126579  n/a   
 
 
-
 
NC_009901  Spea_2175  acyl-CoA dehydrogenase domain-containing protein  29.02 
 
 
401 aa  144  2e-33  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7145  Acyl-CoA dehydrogenase  32.96 
 
 
371 aa  144  3e-33  Burkholderia sp. 383  Bacteria  normal  0.237527  normal 
 
 
-
 
NC_014158  Tpau_3840  acyl-CoA dehydrogenase domain protein  35.44 
 
 
350 aa  144  3e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1476  acyl-CoA dehydrogenase domain protein  32.96 
 
 
367 aa  144  3e-33  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0077917  n/a   
 
 
-
 
NC_011004  Rpal_4234  pimeloyl-CoA dehydrogenase, small subunit  31.62 
 
 
380 aa  143  4e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1645  acyl-CoA dehydrogenase-like  31.92 
 
 
371 aa  143  6e-33  Rhodoferax ferrireducens T118  Bacteria  normal  0.700839  n/a   
 
 
-
 
NC_013131  Caci_5360  acyl-CoA dehydrogenase domain protein  34.86 
 
 
373 aa  142  9.999999999999999e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2910  acyl-CoA dehydrogenase domain-containing protein  29.97 
 
 
372 aa  141  9.999999999999999e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0705936  hitchhiker  0.00613875 
 
 
-
 
NC_009485  BBta_7070  putative pimeloyl-CoA dehydrogenase pimD (small subunit)  29.54 
 
 
380 aa  141  1.9999999999999998e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.562071  normal  0.731705 
 
 
-
 
NC_007974  Rmet_5142  putative acyl-CoA dehydrogenase  32.57 
 
 
392 aa  141  1.9999999999999998e-32  Cupriavidus metallidurans CH34  Bacteria  normal  0.609608  normal  0.24821 
 
 
-
 
NC_009511  Swit_3398  acyl-CoA dehydrogenase domain-containing protein  32.86 
 
 
366 aa  141  1.9999999999999998e-32  Sphingomonas wittichii RW1  Bacteria  normal  0.157056  decreased coverage  0.00584794 
 
 
-
 
NC_010512  Bcenmc03_6882  acyl-CoA dehydrogenase domain-containing protein  29.67 
 
 
380 aa  140  3e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4583  acyl-CoA dehydrogenase domain-containing protein  30.81 
 
 
371 aa  140  3.9999999999999997e-32  Frankia sp. EAN1pec  Bacteria  normal  0.277909  normal  0.943502 
 
 
-
 
NC_007347  Reut_A1568  Acyl-CoA dehydrogenase, C-terminal  35.62 
 
 
390 aa  140  4.999999999999999e-32  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2177  acyl-CoA dehydrogenase domain protein  33.52 
 
 
732 aa  139  6e-32  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00000163847  n/a   
 
 
-
 
NC_009077  Mjls_2573  acyl-CoA dehydrogenase domain-containing protein  32.68 
 
 
374 aa  139  7e-32  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4312  acyl-CoA dehydrogenase domain-containing protein  32.76 
 
 
364 aa  138  1e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.450465 
 
 
-
 
NC_008726  Mvan_4955  acyl-CoA dehydrogenase domain-containing protein  35.04 
 
 
331 aa  139  1e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.216522 
 
 
-
 
NC_008752  Aave_3440  acyl-CoA dehydrogenase domain-containing protein  32.57 
 
 
371 aa  139  1e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  0.746544  normal  0.0926225 
 
 
-
 
NC_010512  Bcenmc03_6857  acyl-CoA dehydrogenase domain-containing protein  30.13 
 
 
377 aa  139  1e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.728752 
 
 
-
 
NC_010676  Bphyt_5105  acyl-CoA dehydrogenase domain protein  30.96 
 
 
384 aa  137  2e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0190  acyl-CoA dehydrogenase domain-containing protein  32.84 
 
 
722 aa  138  2e-31  Mycobacterium sp. JLS  Bacteria  normal  normal  0.353151 
 
 
-
 
NC_013441  Gbro_0689  acyl-CoA dehydrogenase domain protein  30.88 
 
 
370 aa  137  2e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3225  acyl-CoA dehydrogenase domain-containing protein  31.48 
 
 
371 aa  137  3.0000000000000003e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2732  acyl-CoA dehydrogenase domain protein  33.24 
 
 
371 aa  136  7.000000000000001e-31  Acidovorax ebreus TPSY  Bacteria  normal  0.226148  n/a   
 
 
-
 
NC_013440  Hoch_1663  acyl-CoA dehydrogenase domain protein  30.14 
 
 
387 aa  135  8e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.430474 
 
 
-
 
NC_008726  Mvan_0393  acyl-CoA dehydrogenase domain-containing protein  34.15 
 
 
390 aa  135  8e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0209729  normal  0.61958 
 
 
-
 
NC_007974  Rmet_5529  putative acyl-CoA dehydrogenase  34.05 
 
 
379 aa  135  9.999999999999999e-31  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1061  acyl-CoA dehydrogenase domain-containing protein  29.46 
 
 
376 aa  135  9.999999999999999e-31  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6824  acyl-CoA dehydrogenase domain-containing protein  33.7 
 
 
326 aa  134  3e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.151954 
 
 
-
 
NC_008782  Ajs_3394  acyl-CoA dehydrogenase domain-containing protein  33.24 
 
 
371 aa  134  3e-30  Acidovorax sp. JS42  Bacteria  normal  normal  0.396655 
 
 
-
 
NC_013131  Caci_1154  acyl-CoA dehydrogenase domain protein  30.91 
 
 
373 aa  133  3.9999999999999996e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0226  acyl-CoA dehydrogenase domain-containing protein  31.36 
 
 
733 aa  133  3.9999999999999996e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.25373 
 
 
-
 
NC_009953  Sare_2818  acyl-CoA dehydrogenase domain-containing protein  31.11 
 
 
390 aa  133  5e-30  Salinispora arenicola CNS-205  Bacteria  normal  0.447416  hitchhiker  0.00100793 
 
 
-
 
NC_009380  Strop_2619  acyl-CoA dehydrogenase domain-containing protein  31.05 
 
 
366 aa  133  5e-30  Salinispora tropica CNB-440  Bacteria  normal  0.0175274  normal  0.715708 
 
 
-
 
NC_008146  Mmcs_0201  acyl-CoA dehydrogenase-like protein  32.75 
 
 
722 aa  132  6.999999999999999e-30  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0210  acyl-CoA dehydrogenase domain-containing protein  32.75 
 
 
722 aa  132  6.999999999999999e-30  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4774  acyl-CoA dehydrogenase  29.71 
 
 
387 aa  131  2.0000000000000002e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16740  acyl-CoA dehydrogenase  34.3 
 
 
389 aa  130  2.0000000000000002e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2105  acyl-CoA dehydrogenase domain-containing protein  33.99 
 
 
323 aa  131  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0335417  normal 
 
 
-
 
NC_009921  Franean1_1624  acyl-CoA dehydrogenase domain-containing protein  33.15 
 
 
379 aa  131  2.0000000000000002e-29  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3804  putative acyl-CoA dehydrogenase-like protein  31.75 
 
 
369 aa  131  2.0000000000000002e-29  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1105  acyl-CoA dehydrogenase-like protein  29.49 
 
 
379 aa  131  2.0000000000000002e-29  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.492674  normal 
 
 
-
 
NC_014165  Tbis_0801  acyl-CoA dehydrogenase domain-containing protein  32.01 
 
 
736 aa  130  4.0000000000000003e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4560  acyl-CoA dehydrogenase domain-containing protein  32.25 
 
 
379 aa  130  4.0000000000000003e-29  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0375  acyl-CoA dehydrogenase domain-containing protein  32.96 
 
 
375 aa  130  5.0000000000000004e-29  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.507671 
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  28.8 
 
 
383 aa  130  5.0000000000000004e-29  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
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