Gene Plav_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1791 
Symbol 
ID5456672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1944823 
End bp1945278 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content55% 
IMG OID640877371 
Producthypothetical protein 
Protein accessionYP_001413066 
Protein GI154252242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00490564 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.234102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAG TTCCTTTGAT GAAAATTCAC GTTCTTGTCG CCTCGCCATT CGACATCGGC 
GACACGACGC ATGGCAAGCG GCTTGTCGCC AACATTACGG GGGGCGCGTT CGAGGGCAAT
CGCCTAACGG GCACCGTTTG CAGCAGTGGC GCCGACTGGA TCGTCATCGA TTCCGAGAAT
TTGGGGCATA TCGACGTGCG GATCGTTCTG CAGACGAACG ATGGCGCACA CATCTATGTT
CATTATACGG GCTTTCTCGA ATATAACGAC AAGTTCGTCA CCGCGGCGCT TAGTGGCGGA
GAAACGAAAA TCGGCGACTC GTATTTTTTG AGCCAGCTGC GTTTCGAGAC CGGCGCCGAA
AAATATAAAT GGTTGAACAG GGTTCTGGGC GTCGGGGAAG GGCGCGTTTA TCCCGGCGGC
ATCGAGTATC AGGTTTACGA GCAGGCGCAC GATTGA
 
Protein sequence
MKLVPLMKIH VLVASPFDIG DTTHGKRLVA NITGGAFEGN RLTGTVCSSG ADWIVIDSEN 
LGHIDVRIVL QTNDGAHIYV HYTGFLEYND KFVTAALSGG ETKIGDSYFL SQLRFETGAE
KYKWLNRVLG VGEGRVYPGG IEYQVYEQAH D