| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1766 |
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| Symbol | |
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| ID | 5453857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1918539 |
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| End bp | 1920179 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877347 |
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| Product | cyclohexanecarboxylate-CoA ligase |
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| Protein accession | YP_001413042 |
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| Protein GI | 154252218 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR03208] cyclohexanecarboxylate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.810333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.381602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATC CAATTCTGAC CAGGAAGCGT GTCGAGGCGA TGAACGCCGG CGGCTTCTGG
CCGGGCAAGA CCGCCGCCGA CTATCTCGAC GGTTGCATCG CCAAAATGCC GGACAAGACG
GCCGTCGTCG ATTTCAACTC CATGACGAAC AAGGCCACCC GCCTCAGCTA CCGCGATTTA
GGCAAGATCG TGGAACGTAT CGCGGTCGGC CTCGCGGAAC TCGGCGTGGA GAAAGGCGAT
GTTGTTTCCT GCCAATTGCC GAACTGGTGG CAATTCACCG CGCTGCATCT GGCTTGCGTA
CGGATCGACG CCGTGACCAA TCCATTGATG CCGATTTTTC GCGAGCGCGA ATTGTCCTTC
ATGCTTGGCC TTGCGGAAAG CAAGGTACTC GTCATCCCGC GCACCTTTCG CGGCTTTGAT
TACCCTGCCA TGGTGGCCAA CATCCGGGCC GGCCTGCCGC AGCTGAGGAA TGTGCTCGTC
ATCGGCGGCG ACGGCGAAAC CAGCTTTGAG AAAGTCCTTC TTGATACGCC GTGGGAGCAG
CGGCGCGACG CCGGCCGTCT CTTCGCGGCG CGACGGCCCG ATCCCGACGA CGTAACGCAG
TTGATGTATA CGTCCGGCAC GACCGGCGAA CCGAAAGGCG TCATGCATAC GTCGAATACG
CTGCTCTCCA ATATCCTCGT CTGCGCCGAG CGCCTCGGGC TCGGCGCGGA CGACGTGATG
TTCATGGCGT CGCCGATGGC GCACCAGACA GGCTTCATGT ACGGGCTGGC GATGCCCGTT
CTGGCCGGAG CGACCGCCAT TCTGCAGGAT GTGTGGGAGC CGAAGCGCGC CTCCGCGTCG
ATCTCCCGCG AAGGAATCAC CTTCACCATG GCGTCCACGC CGTTCCTGTC CGATCTGACC
GAAACGGTGG CGGCGGACGG GAGCGACGTA TCCCGTTTGC GCATCTTCCT GGTGGCAGGC
GCCCCCATCC CCCGCGCGCT TGTCGAGCGG GCGCGGCAAA TCCTCGGGGC GAACATCGTG
TCGGCCTGGG GCATGACCGA GAACGGCCTG GTGACAACGA CATGCCTCGA CGATCCGGAC
GACAAGGCGA TCAATACTGA CGGACGCGCG CTGCCAGGCA TGGAAGTCCA GGTGGTCGAC
AGCGAGAACA AACCCCTGCC CGCCGGCGAG GAGGGCATGC TCAAGGCTCG CGCCTGTTCG
ACTTTTGTTG GCTATCTCAA AAGACCGGAC TGGTACAATC ACGACGCGGA AGGCTGGTTC
GGCACAGGCG ACCTGGCGCG GATCGACGGC CAAGGCTATA TCCGGCTGAC CGGACGCTCC
AAGGACATCA TCATCCGCGG CGGCGAGAAT ATCCCCGTGG TCGAGATCGA AGGCCTGCTC
TTCCGTCATC CCGACATTCA GGATGTAGCG ATCGTCGGCG TACCGGATGA ACGGCTGGGC
GAACGGGCAT GTGCGTTCAT CGTGCCGAAG CCCGGCCGCG AGGTTGGCTT GCGCGAGGTG
GTCGCCTTCC TCGAAGAGCA CAGGGTAGCG AGGCAATACC TGCCGGAACG GGCGGAAATC
GTCGGCGAAC TGCCTCGAAC ACCGAGCGGC AAGGTACAGA AGTTCAAGCT GCGCGAGATC
GCCGTCGCCC TGCCGGCATG A
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| Protein sequence | MFDPILTRKR VEAMNAGGFW PGKTAADYLD GCIAKMPDKT AVVDFNSMTN KATRLSYRDL
GKIVERIAVG LAELGVEKGD VVSCQLPNWW QFTALHLACV RIDAVTNPLM PIFRERELSF
MLGLAESKVL VIPRTFRGFD YPAMVANIRA GLPQLRNVLV IGGDGETSFE KVLLDTPWEQ
RRDAGRLFAA RRPDPDDVTQ LMYTSGTTGE PKGVMHTSNT LLSNILVCAE RLGLGADDVM
FMASPMAHQT GFMYGLAMPV LAGATAILQD VWEPKRASAS ISREGITFTM ASTPFLSDLT
ETVAADGSDV SRLRIFLVAG APIPRALVER ARQILGANIV SAWGMTENGL VTTTCLDDPD
DKAINTDGRA LPGMEVQVVD SENKPLPAGE EGMLKARACS TFVGYLKRPD WYNHDAEGWF
GTGDLARIDG QGYIRLTGRS KDIIIRGGEN IPVVEIEGLL FRHPDIQDVA IVGVPDERLG
ERACAFIVPK PGREVGLREV VAFLEEHRVA RQYLPERAEI VGELPRTPSG KVQKFKLREI
AVALPA
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