| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1729 |
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| Symbol | |
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| ID | 5453852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1870294 |
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| End bp | 1871655 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877304 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001413005 |
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| Protein GI | 154252181 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAG CCGCAGTGGA GAAAGCTGCA CCGCCCGCGA CGTTGTCGCC GGGGTACAGG
CGCTACGCAC TTTTAATTCT GGTGCTCGGC TACACGTCGA GCCATGTGGA CCGCAACATC
GTCGGCATTC TGATGGAGCC GATCAAGGCG GATCTCCTTC TTTCAGACAC GCAGCTCGGT
TTTCTTTCCG GCATTGCCTT CGCCGTCTTC TATGCAACGC TTGGCATTCC GATCGCGTTG
TGGGCGGACC GCGGCAACCG CCGCAACATC ATCGCCTGGG CGATTGCAAT CTGGAGCGGC
ATGACGGCCC TTTGCGGCCT TGCGACGAAT TTCGTCCAGC TCGCGGCGGC TCGCGTCGGC
GTGGGCATCG GTGAAGCGGG TTCAAGTCCG CCATCGCATT CCATGATCGC CGATATGTAT
CCGCCGAACG AACGTGCCAG TGCCATGGCT GTCTATTCAC TCGGTGTCTA TTTCGGCGTC
ATGATCGGCT TCCTCGTCGG CGGCTGGGTG GCTGTCTGGT ATGGCTGGCG CGCGGCCTTT
TTCGTGGTCG GTTTGCCGGG CCTCATTCTG GCATTGCTCG TCCGTTTCAC GCTGGTGGAG
CCGGAGCGCG GCGGTGCGGA CGGCATAGCG CCGGAAAAAC ATGCGCCGCT CAGCTTCCGC
ACGGCGGCCA ATACCGTGAA GGAAGGCTTC CACCATCTCT GGCGGACGGC TGCGGCGCGT
CACGTCGTCA TCGGCGTCAC GATTACTTCC TTCGTCGGCT ATGGCGGCGT CATGTGGGGT
CCCGCCTTCC TCATCCGCAC GCATGGAATG TCGATTGGTG AGGTTTCGAC GTTCCTCGCC
TTGCTGGTCG GCATTGTCGG CGGCCTCGGC GCTTATATCG GGGGACGGTT GACGGATCGT
CTGGCGCAGA AAGATGTGCG CTGGAACACA TGGGTCGTCG CGTGGGCGAA GCTGATCGTG
GTGCCTTTCA TCGTCGCCTT CTATCTCTCC GACAATTGGG TCGCCTTCCA TGTGGCGGGT
TATCCGGTCT CGATCCTCTG GGTCATCTAT GTGCCGATCT CGTTCCTCGG CGCCTTTTAT
CTCGGACCGT CCTTCGCGAT GATCCAGACG CTGACGCCAC CTGCCAAGCG CGCGCTTGCG
TCGGCGGTGA TGCTTTTTAT CATCAACATC ATCGGTCTCG GCTTCGGGCC GCAATTCGTC
GGGATCCTGT CGGACTTCTT CAACTACTCG ATGGGCATGG GAACGCAGTC GTTGCGCTGG
GCCTTGTTCG GCACGGCCTT GCTCAATGTA TGGGCGGCGG CGCATTACTT CCTCGCCGGC
CATCAACTGA AAAAGTCGCA ATCGGGCGGG CATCGCGCCT GA
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| Protein sequence | MAEAAVEKAA PPATLSPGYR RYALLILVLG YTSSHVDRNI VGILMEPIKA DLLLSDTQLG
FLSGIAFAVF YATLGIPIAL WADRGNRRNI IAWAIAIWSG MTALCGLATN FVQLAAARVG
VGIGEAGSSP PSHSMIADMY PPNERASAMA VYSLGVYFGV MIGFLVGGWV AVWYGWRAAF
FVVGLPGLIL ALLVRFTLVE PERGGADGIA PEKHAPLSFR TAANTVKEGF HHLWRTAAAR
HVVIGVTITS FVGYGGVMWG PAFLIRTHGM SIGEVSTFLA LLVGIVGGLG AYIGGRLTDR
LAQKDVRWNT WVVAWAKLIV VPFIVAFYLS DNWVAFHVAG YPVSILWVIY VPISFLGAFY
LGPSFAMIQT LTPPAKRALA SAVMLFIINI IGLGFGPQFV GILSDFFNYS MGMGTQSLRW
ALFGTALLNV WAAAHYFLAG HQLKKSQSGG HRA
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