| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1717 |
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| Symbol | |
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| ID | 5453973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1857222 |
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| End bp | 1858340 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877292 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001412993 |
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| Protein GI | 154252169 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.9764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA CCATCAAGAA AGTGAATGTC GCCCTTGGCG ACCGCGCCTA CGACATTTTC
GTCGGACCCG GCCTTATTGC GAATGCAGGC GCCTATCTGA AGCCGCTGCT CCGGCGCAAC
CGCGTCGCCA TCGTGACCGA TGAGACGGTG GGCAAGCTGC ATCTGCCGGC GCTGGAAAAA
AGCCTCGACG CGAACGGCAT CCGTCATTCG GCGATCAAAC TGCCGGCGGG CGAGAGCACG
AAATCTTTCG CGCAACTGGA AAAGCTGACC GACTGGCTGC TCGGCGAAGG GATCGAACGC
GGCGACCTCG TGATTGCGCT GGGCGGCGGC GTGATCGGCG ACCTGACCGG CTTCGCGGCC
TCCATCCTCA GGCGCGGCGT GGACTTCGCG CAGATACCGA CCACGCTGTT GTCGCAGGTG
GACAGCTCCG TCGGCGGCAA AACCGGCATC AACACGAGAC AGGGCAAGAA CCTCGCCGGC
GCCTTCCACC AGCCGCGTCT CGTGCTCGCG GACACGGACG CGCTGGCGAC ACTGCCGATG
CGGGAGTTTC TCGCGGGCTA TGCCGAAGTC GTGAAATACG GGTTGATCGG CGACCGCGAT
TTCTTCGAAT GGCTCGAAGT CAATCTCGAC AGGCTGAAGG AAGGCGACGT CGAGGCGCGT
ATCCATGCGA TCGTCAAAAG CTGCGAGGCA AAGGCCGCGA TCGTTGCCGC GGATGAACGC
GAAGGCGGCG TGCGCGCGCT TCTCAATCTC GGCCACACCT TCGGCCACGC GCTTGAGGCC
GCGACCGGCT TTTCAAACCG CCTCGTGCAT GGCGAAGGCG TATCCATCGG CATGGCGCTC
GCCTTTGAAC TTTCGGCGCG GCTCGGCTTC TGCACGGGGC AGGATGCGGC GCGCGTGCGC
CAGCATCTGG CACGCGCCGG ATTGCCCTCG CGCCTTTCGG ACATAGAGGG CCCGCTTCCC
GATGCGGACG GCCTGATCGC CCTGATGGGG CAGGACAAGA AGGTTGTGGA CGGCACGCTC
ACCTTCATTC TTGCCCGCGG CATCGGCGAT GCCTTCATTA CGCGCGACGT CGATCCCGGC
CGCTTGCGCG CTCTGCTGCG GGAAAGGGAG CCCGCCTGA
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| Protein sequence | MTDTIKKVNV ALGDRAYDIF VGPGLIANAG AYLKPLLRRN RVAIVTDETV GKLHLPALEK
SLDANGIRHS AIKLPAGEST KSFAQLEKLT DWLLGEGIER GDLVIALGGG VIGDLTGFAA
SILRRGVDFA QIPTTLLSQV DSSVGGKTGI NTRQGKNLAG AFHQPRLVLA DTDALATLPM
REFLAGYAEV VKYGLIGDRD FFEWLEVNLD RLKEGDVEAR IHAIVKSCEA KAAIVAADER
EGGVRALLNL GHTFGHALEA ATGFSNRLVH GEGVSIGMAL AFELSARLGF CTGQDAARVR
QHLARAGLPS RLSDIEGPLP DADGLIALMG QDKKVVDGTL TFILARGIGD AFITRDVDPG
RLRALLRERE PA
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