| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1694 |
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| Symbol | |
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| ID | 5454346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1830149 |
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| End bp | 1831201 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877269 |
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| Product | CarD family transcriptional regulator |
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| Protein accession | YP_001412970 |
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| Protein GI | 154252146 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.335809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.132221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCA CAAAGAAGAA AGCACCCAAG TCCAAACCCG CGCCTGCGAA GTCCAAAGCG
GCGGTAAAGC CCGTTAAAGT TCGCGCCAAG GCGGCGAGCG CCAAGACCAA CGCGACCAAG
AAATCGGCGC CTGCAAAGGC AAAGGCTGCG GCAAAGCCCG CCGCCAAGGC GAAGGCAGCC
ACGAAGCCCG CAAAGGCGAA AGCGGCTCCG AAGACAGCTG CCAAGCCGGC CGCGAAAGCC
GCCCCCGCGA AACCCGCAAA GGCAAAGGCT GCGCCCGCAA AACCGGCTGC AAAGAAAAAG
GCGACCGCGA AAAAGCCGGA ACTGAAGGCT CCGCCGCCGA AAGCTGCCGG AACGAAGCCC
ACCAATGCCG CGAGCAAATT GATGGCGGCG GCGAAAAGCC GCGCGGAGAA GGCACGGACG
GAAGAAACGG CGGCCGCCAA GGAATTGGCG GCAAAGCAGG CTGCGACTGA AGCTGCCGCG
AAAGCGAAAG CCGAAGCAAC GAAACCCGCC GCCCCGCGCG CAAATTTCAA GGCGAAGGAA
TTCGTCGTTT ACCCCGCTCA CGGCGTCGGC CAGATCCTCG ATATCGAGGA ACAGGAAGTC
GCCGGCCACA AGCTGGAACT TTTCGTCATC AACTTCGACA AGGAGAAGAT GACGTTGCGC
GTCCCCACCA ACAAGGCCGG GGCCGTCGGC ATGCGCAAGC TTTCCGACGC AGGCGTGGTC
GACTCCGCGA TTGAAACCTT GCGTGGCCGC GCCCGCATCA AGCGCACCAT GTGGAGCCGC
CGTGCACAGG AATACGAGGC CAAGATCAAC TCCGGCGATC TGATTTCGAT CGCGGAAGTG
GTCCGGGACC TCTACCGCTC GGAGCGGCAA CCGGAACAGT CTTATTCCGA ACGTCAGCTC
TATGAAGCCG CCCTTGACCG GATGGCGCGC GAAGTGGCCG CCGTCGAGCG GATCGGCGAG
GACGCCGCGA TCGAGCGAGT CGAGCAGGCT TTGCAGGGAG CCGCAAAGAC GGACAAGGCG
CCAAAATCGG ATGAGGCGAG CGAAGCCGCC TGA
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| Protein sequence | MASTKKKAPK SKPAPAKSKA AVKPVKVRAK AASAKTNATK KSAPAKAKAA AKPAAKAKAA
TKPAKAKAAP KTAAKPAAKA APAKPAKAKA APAKPAAKKK ATAKKPELKA PPPKAAGTKP
TNAASKLMAA AKSRAEKART EETAAAKELA AKQAATEAAA KAKAEATKPA APRANFKAKE
FVVYPAHGVG QILDIEEQEV AGHKLELFVI NFDKEKMTLR VPTNKAGAVG MRKLSDAGVV
DSAIETLRGR ARIKRTMWSR RAQEYEAKIN SGDLISIAEV VRDLYRSERQ PEQSYSERQL
YEAALDRMAR EVAAVERIGE DAAIERVEQA LQGAAKTDKA PKSDEASEAA
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