| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1688 |
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| Symbol | |
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| ID | 5456206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1823670 |
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| End bp | 1824626 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877262 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001412964 |
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| Protein GI | 154252140 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.0593754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCCG ACGCAAGACG TATTCTCGTC ATCAAGCATG GCGCCTTCGG CGATGTGATC
CAGGCGGAAG GCGCCTTGCG CGACATTCGC GAAAACCACC CGGACGCCCG CATCACCATA
TTGACGATGC CCGCCTACCG CGCCCTGCTC GCGCGTTCGC CCTTCATCGA TGAGGTGATC
GTCGACGAGC GCGCACCGCG CTGGCGGCTT GACCGGATGC TGGCGCTGAG GAAGCGCCTG
CGCGAAGCGG ATTTCGACAT GGTCTACGAC CTGCAGAATT CCAGCCGGAC GAATTTCTAC
TATCGCTTCA TGCTGAGGGA CCGCCGCTGG TCCGGCACGG CGAAAGGCTG CAGCCACCCG
CACCGCGCGA AAGACCCAAA GAAAATCCGC ACGCTCGACC GGCTCGCCGG ACAGCTGGCC
GATGCGGGGC TCACCATCCG CCACACGCGA AAGCCCGACA TCTCATGGCT TGCAGACGAT
GTGACGGCGC TGCTGGCGGC GGCGCATGTG GCGCGGCCCT ATATCGTTCT GGTGCCCGGC
TGTTCGGCCC GGCATCCGCA AAAACGCTGG CCGCATTACG ACAAGCTCGC CGAAGCGCTG
ATCTCCGCCG GACATACGGT CGTGATGGCG CCGGGGCCGG ACGAGATGGA GCTTGCGAAA
ACCATTCCCG GCATCCGCCT TACCGACACG CATGGCCTGC TGAACTGGAA CGAACTTGCC
GGCGTCTTCC GCAATGCCCT CTTCGTCGTC GGCAACGACA CGGGACCGAG CCACCTTGCG
GCGCATATCG GAACGGAAGG GCTCGCCCTT TTCGGCAGCT ATTCGCCGGC CGAGCGGACG
GGCATCATCC GCGACAATTT CGGCGTGATC GAGGTCGAGG ACCTCGAAGC CCTTTCGGTA
GAGCGCGTCT TCAACGAAGT GACGCGCCGC CTCGAAGCTC ACTCGAATTC GGTATAG
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| Protein sequence | MPPDARRILV IKHGAFGDVI QAEGALRDIR ENHPDARITI LTMPAYRALL ARSPFIDEVI
VDERAPRWRL DRMLALRKRL READFDMVYD LQNSSRTNFY YRFMLRDRRW SGTAKGCSHP
HRAKDPKKIR TLDRLAGQLA DAGLTIRHTR KPDISWLADD VTALLAAAHV ARPYIVLVPG
CSARHPQKRW PHYDKLAEAL ISAGHTVVMA PGPDEMELAK TIPGIRLTDT HGLLNWNELA
GVFRNALFVV GNDTGPSHLA AHIGTEGLAL FGSYSPAERT GIIRDNFGVI EVEDLEALSV
ERVFNEVTRR LEAHSNSV
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