| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1678 |
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| Symbol | |
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| ID | 5453557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1813289 |
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| End bp | 1814056 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877252 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001412954 |
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| Protein GI | 154252130 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.157032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATC TTTTCAGCGT CGAGGGCAAG ACCGTGCTCA TCACCGGCGG CTCGCGCGGC
ATCGGCGAGA TGATCGCGAC CGGCTTCGTG GAGAACGGCG CCAAAGTCTA TATCACCGCG
CGCAAGGCAC AGGCCTGCAA CGAGCTGGCG GAAGAACTGT CAAAGAAGGG CACCTGCATC
TCGCTCCCCT TCGACCTCGG CACGCAGGAA GGCATTGCCG GCATCGCCGC CGAACTCGGC
AAGCGCGAGC CTAAGCTCGA CGTGCTCATC AACAATGCGG GCGCGGCCTG GGGCGAGCCG
ATCGACGAAT ATTCCGAGAG CGGCTGGGAC AAGGTGCAGA ACATCAACCT CAAGGGCGTG
TTCTTCCTGA CGCAGAAAAT GCTGCCGCTG CTCAGGAAAT CCGCGAGCGC CGACAACCCG
GCCCGCGTCA TCAACACGGC CTCCGTCAAC GGCATCGAGC CGCCGGACCT CGAGACCTAT
GCATACTCGT CGTCGAAGGC CGGCGTCATC ATGCTGACGC GGCATCTGGC GAAGCGGCTG
GCGCGCGAGC ACATCCTCGT CAACGCCATC GCGCCCGGAC CCTTCCCGAG CCAGATGATG
AAGGCGACAC TGGAAACCTT CGGCGACGCG ATCAAGGCGG GCAATCCCTT GGGCCGCATC
GGCACGCCGG AAGACGCCGC CGGCGTGGCG ATCTTCCTCG CCTCGCGGGC GAGCGCCTAT
ACGACCGGCG CGACCATTCC TGTGGATGGC GGCTCGGCGG AAGTTTGA
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| Protein sequence | MKNLFSVEGK TVLITGGSRG IGEMIATGFV ENGAKVYITA RKAQACNELA EELSKKGTCI
SLPFDLGTQE GIAGIAAELG KREPKLDVLI NNAGAAWGEP IDEYSESGWD KVQNINLKGV
FFLTQKMLPL LRKSASADNP ARVINTASVN GIEPPDLETY AYSSSKAGVI MLTRHLAKRL
AREHILVNAI APGPFPSQMM KATLETFGDA IKAGNPLGRI GTPEDAAGVA IFLASRASAY
TTGATIPVDG GSAEV
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