| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1652 |
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| Symbol | |
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| ID | 5454214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1785527 |
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| End bp | 1786507 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640877226 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001412928 |
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| Protein GI | 154252104 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.685243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTGG GTCTCAGCCG GTTTCAATAT ACGAAGGGCC TGCACGATCT CGGCAATGGC
GGCTATGCCT GGCTGCAGCC GGACGGCGGA TGGGGCTGGT CGAATGCCGG CCTCATCGTC
GATGGGGGTG AATCGTTTCT CATCGATACA TTGTTCGACG TACCGCTCAC CCGCGACATG
CTCGATGCCA TGCGGAAGGC GGAACCGAAG GCCGCCGCAA AGATAAACAC ACTCGTCAAC
ACGCATCACA ATGGCGACCA CTGCAACGGT AACGAATGCT GCCAGGGTGC TGAAATTATT
GCACACAAGC TCGCGGTTGA AGGCATGCGG CACGAACCGC CCGCCCTGCT CGCGGGCTTT
CTGGACATGG CACCAGGTCT CGGCGACCTC GGCAAATATG TGAAGCAGTG CTTCGGTCCC
TTCGATTTCA AGGGCGTTAC GCAAACCCTG CCGGAAGTGA CTTTCGAGAC GGAACTCACG
CGCCATGTCG GATCGAAGGA AATTCGCATC ATGCATGTAG GCCCTGCTCA CACGCCGGGC
GATGCGCTTG TTTACGTTCC GGCCGACAAG ACGGTTTTCA CGGGCGACAT TCTGTTCATC
GAGGGGCATC CGATCATGTG GGAAGGACCC GTCTCGAACT GGATCGACGC CTGCGACAGG
ATCATGGCGA TGGACGTTGA AACCGTCGTG CCGGGCCATG GACCCATCAC TGGCAAGAAC
GGTGTGAAGG CGGTACGGGA TTATCTGGTC TATGTCCGCG ACGAAGCGCG TAAACGCTAC
GACGCCGGCC TGTCTGCGTT TGACGCCGCG CTCGATATCG ACATGACGGA CTACGATAGC
TGGGGCGACG GAGAACGGAT CGTCGTCAAC GTCACGACGC TCTACAAGGA ATTTTCCGGC
GACGACACAC CAAACGACGT GCCAACGATC TTTGGCCAGA TGGCGGAAAT TACAAAAAGA
CAAGGCCGTC TGAAAGGCTG A
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| Protein sequence | MGLGLSRFQY TKGLHDLGNG GYAWLQPDGG WGWSNAGLIV DGGESFLIDT LFDVPLTRDM
LDAMRKAEPK AAAKINTLVN THHNGDHCNG NECCQGAEII AHKLAVEGMR HEPPALLAGF
LDMAPGLGDL GKYVKQCFGP FDFKGVTQTL PEVTFETELT RHVGSKEIRI MHVGPAHTPG
DALVYVPADK TVFTGDILFI EGHPIMWEGP VSNWIDACDR IMAMDVETVV PGHGPITGKN
GVKAVRDYLV YVRDEARKRY DAGLSAFDAA LDIDMTDYDS WGDGERIVVN VTTLYKEFSG
DDTPNDVPTI FGQMAEITKR QGRLKG
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