| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1418 |
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| Symbol | |
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| ID | 5456995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1549804 |
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| End bp | 1551318 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876991 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001412695 |
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| Protein GI | 154251871 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGAAA ACCTGACAGG CCGCCTCGGC GACGTTCTTT CCAAGCTCAA GGGCCGCGGC
GCCCTGAGCG AGAAGGACGT GGACGAGGCC ATGCGCGAAG TGCGCCGGGC GCTGCTCGAG
GCCGACGTCG CGCTGCCTGT CGCCAAATCC TTCATCGACA AGGTGCGGGC GCGCGCCATC
GGGCATGAGG TCCTGAAGTC GGTCACGCCC GGCCAGCAGG TCATCAAGAT CGTCCATGAC
GAACTGGTGG AAATGCTGGG CGGTGCCGAG GCCGATACGT CGATCTCGCT TCGCGCCGCC
GCCCCTGTCG TCATCATGAT GGTGGGCCTG CAGGGTTCGG GCAAAACCAC CTCGACGGCG
AAGATCGCCA AGCGCATGAC CACGCGCGAC AAGCGCCGCA TCATGATGGC GTCGCTCGAC
ACGCGCCGTC CCGCCGCGCA GGAACAGTTG AAGATTCTCG GCGAGCAGGC CGGCGTCGCG
ACGCTGCCGA TCGTTGCCGG TCAGCAGCCG GTGCAGATCG CGAAGCGCGC GGTCGAGGCT
GCCCGTCTCG GCGGCTTCGA TGTGCTGATG CTCGACACGG CGGGCCGTAT CCATATCGAC
GAAGACCTGA TGGCGGAAGT CGCGCAGGTG CGCGATGCCG CCAATCCGCA CGAGACGCTG
CTCGTCGCAG ACAGCCTGAC CGGCCAGGAT GCCGTCAATG TCGCCGAGCA GTTCAATGCC
CGCATCGGCG TCACCGGCAT CGTGCTGACG CGCGTCGATG GCGACGGACG CGGCGGCGCC
GCGCTTTCGA TGCGTGCGGT CACGGGCGTG CCGATCAAGC TTCTCGGCAC CGGCGAAAAA
ATGGACGCGC TGGAGGATTT CCGCGCCGAC CGTGTCGCCG GACGCATCCT CGGCATGGGC
GACGTCGTCA GCCTTGTCGA GAAAGCCGCC GAAACCATCG ACGCCGACAA GGCGAACAAG
ATGGCCGAGC GCATGCGCAA AGGCCAGTTC GACCTCGATG ACATGGCCGA GCAGCTCGCG
CAGATGGGCC GCATGGGCGG CATGAAGGGC GTTCTCGGCC TCCTGCCCGG CGTCGGCAAG
GCGCAGATGC AGGCCGCGCA GGCGCATATG GACGACAAGG TGGTGAAGCG CCAGGGCGCG
ATCATTTCCT CGATGACGAA GGAAGAGCGC CGCAACCCGA AAGTGCTGAA TGCAAGCCGC
AAGAAGCGCA TCGCGCGCGG CTCCGGCACC GAGGTTCAGG AAATCAACCG CCTGCTGAAG
ATGCATCGCC AGATGGCGGA CATGATGAAG GCGATGGGCC GCCAGAAGGG CGGCATGTTG
AGCAAGCTTT TCGGCGGCGG CGCGCCGGAG ATGCCGCCAG AGATGGCGGC GGATCCGAAG
GCGCTGCAGA AAATGCTGCC GCCCGGCGGG CTTCCGCGCG GGCTCGGCGG CGGATTGCCC
GGCCTGCCGG GTTCCGGTTT CGGGGGCGGT CTGCCGGGTT TGCCCGGCCT GCCGTCCGGC
AAGAAAAAGA AATGA
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| Protein sequence | MFENLTGRLG DVLSKLKGRG ALSEKDVDEA MREVRRALLE ADVALPVAKS FIDKVRARAI
GHEVLKSVTP GQQVIKIVHD ELVEMLGGAE ADTSISLRAA APVVIMMVGL QGSGKTTSTA
KIAKRMTTRD KRRIMMASLD TRRPAAQEQL KILGEQAGVA TLPIVAGQQP VQIAKRAVEA
ARLGGFDVLM LDTAGRIHID EDLMAEVAQV RDAANPHETL LVADSLTGQD AVNVAEQFNA
RIGVTGIVLT RVDGDGRGGA ALSMRAVTGV PIKLLGTGEK MDALEDFRAD RVAGRILGMG
DVVSLVEKAA ETIDADKANK MAERMRKGQF DLDDMAEQLA QMGRMGGMKG VLGLLPGVGK
AQMQAAQAHM DDKVVKRQGA IISSMTKEER RNPKVLNASR KKRIARGSGT EVQEINRLLK
MHRQMADMMK AMGRQKGGML SKLFGGGAPE MPPEMAADPK ALQKMLPPGG LPRGLGGGLP
GLPGSGFGGG LPGLPGLPSG KKKK
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