| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1405 |
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| Symbol | |
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| ID | 5455800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1538927 |
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| End bp | 1539604 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876978 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_001412682 |
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| Protein GI | 154251858 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGGG CCTTTTTCGC GCTTCTCCTC CGCGATCTTC GTCTCGCCGC CCGGCTTGGC
GGCGGCGGAG GCATGGCCGT CTTCTTCTTC CTGGTCGTTG TCGCCATCGT GCCGCTCGGC
ATCGGTCCCG AAAAGGGGCT GCTCTCGGCC ATAGCGCCCG GCATGCTCTG GGTGGCGCTG
CTGCTGGCGG CGCTGTTAAC GCTCGACCGG CTCTTCCAGG CCGATTTCGA GGATGGATCG
CTCGATCTGC TCTCCACGGG GTCTCTGCCG CTTGAACTTG TGGCGGTCGC GAAGGCGCTC
GGACATTGGC TCACCACGGG CCTCCCCCTT GTGGTGGCCG CCCCGCTGCT CGGGCTCCTC
CTCAATCTGC CGGCAGACGC CTTTCCCCAG CTTCTTCTTG CAATGCTTGT CGGTACGCCC
GCCTTGAGCT TTCTGGGTGC CATAGGCGCC GCGCTGACCG TCGGGATCCG GCGGGGCGGG
CTTCTTGCCT CGCTTCTGGT GCTGCCTTTC TATATTCCGG TGCTGATTTT CGGCGTTGGC
GCGGCCAGCT CGGCATCCGC GAGTTTCGAG GGCGAGGCGG GGCCCCAGAG CCTGTTGCTT
CTGGGCGCGG TCACGCTTGG CAGTTTCGTG CTGGGGCCCG TCGGTGCCGC CGCCGCGCTC
CGCGCCCATC TCAGATGA
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| Protein sequence | MMRAFFALLL RDLRLAARLG GGGGMAVFFF LVVVAIVPLG IGPEKGLLSA IAPGMLWVAL
LLAALLTLDR LFQADFEDGS LDLLSTGSLP LELVAVAKAL GHWLTTGLPL VVAAPLLGLL
LNLPADAFPQ LLLAMLVGTP ALSFLGAIGA ALTVGIRRGG LLASLLVLPF YIPVLIFGVG
AASSASASFE GEAGPQSLLL LGAVTLGSFV LGPVGAAAAL RAHLR
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