| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1344 |
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| Symbol | |
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| ID | 5454471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1476741 |
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| End bp | 1477367 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876915 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001412621 |
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| Protein GI | 154251797 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.000662672 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGCTC CAGACGATAC GCACCAGAAA ATCATTGCCG CCGCCAAACG GCGCTTCATG
CATTACGGCT ACACGAAAAC AACGATGGCC GAACTCGCCG TCGATTGCGA TATGTCGCCC
GGCAATCTCT ACCGTTATTT CGCGGGCAAG CTCGACATAG CGGAGGCGAT CTGCCGCGAA
GCGTCGATGC AGACGGCGGA AGACCTGTCG CGCATTCTCA CCACGCCGGG GCGCACCGCC
GCGGAGCGGC TGCATGATTT CCTTTTCATG GATCTCCGGG AGACCTTCCA CAAGCTCGAG
GACGATCCCA AGATCGTCGA GATGGCGCAG ATCGTCACCG CCGAGCGGCC GGAATTTCAC
AATGAAGGTC TGAAGCGCGA GCGCGAAGTG CTTTGCCGCA TCATCGAACT CGGCAATCTC
TCCGGCGAAT TCCAGGTCAC CGATCCGGAT TTCGCGGCCG AGATGATCCA GGCGGCCACT
CTCAAGTTCA GCTATCCGCA GCTTTTCACG CGCCTGCCGC TCGTCAAACT CGAGCGCGAA
CTCGAAGGCG TCTACCAGCT CATCGTCGCC GGCTTGCAGT CCGGCGCCGC ATGTTGCGAT
CCGGAAAAGC GCCTCATCAC CGCTTGA
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| Protein sequence | MTAPDDTHQK IIAAAKRRFM HYGYTKTTMA ELAVDCDMSP GNLYRYFAGK LDIAEAICRE
ASMQTAEDLS RILTTPGRTA AERLHDFLFM DLRETFHKLE DDPKIVEMAQ IVTAERPEFH
NEGLKREREV LCRIIELGNL SGEFQVTDPD FAAEMIQAAT LKFSYPQLFT RLPLVKLERE
LEGVYQLIVA GLQSGAACCD PEKRLITA
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