| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1311 |
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| Symbol | |
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| ID | 5454976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1447397 |
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| End bp | 1448080 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876881 |
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| Product | peptidase S16 lon domain-containing protein |
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| Protein accession | YP_001412588 |
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| Protein GI | 154251764 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.28291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.00327586 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCTCA CGGAGCAATA TAGCGACACT GCCGACCTGC CGGGGGTGCT CCCCGTTTTT
CCGCTGGCGG GCGCCATATT GCTGCCGCGC GGACAGCTGC CGCTCAATAT TTTCGAGGAT
CGCTACCTGA AGATGGTGGA CGACGCCATT CGCGGCGACC GCATCATCGG CATGGTGCAG
CCGGACGGCG ACGAGGCGAT TGCCGCCTCG CAGATAGAGG GCAAGAAGCC GCCGCTCTGC
GCGATTGGTT GCGCGGGCCG CATCACCTCC TTCGCGGAGA CGGGCGACGG GCGCATTGTC
ATCACGCTGA CGGGCATTGC GCGTTTCCGC ATCACGGGCG AGCTGCCCGC CATGACGCCC
TACCGGCAAT GCGAAGTGAG CTGGGATGAA TTCGCCGACG ATCTCACGGC GGGTCACGAC
CAGGACAAGG TGAGCCGCGA ACGCCTGCTG GAAATCCTGA AGGAATATCT CGACACGCAT
GGCCTGCAGG CCGACTGGCG CGCGATCCGT CTTTCCTCGA ACGAAACGCT GGTGAACTCG
CTCTGCACGA TCAGCCCTTA TGGGCCGCGC GAGAAACAGG CGCTGCTTGA GGCGAAAACA
CTCGAGGACC GCAACCAGAT GCTGATCGCG CTGACCGAGA AGGCGCTGCG CGAACTCACC
CCCGGCGATG CGACCGTGCA ATAA
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| Protein sequence | MTLTEQYSDT ADLPGVLPVF PLAGAILLPR GQLPLNIFED RYLKMVDDAI RGDRIIGMVQ
PDGDEAIAAS QIEGKKPPLC AIGCAGRITS FAETGDGRIV ITLTGIARFR ITGELPAMTP
YRQCEVSWDE FADDLTAGHD QDKVSRERLL EILKEYLDTH GLQADWRAIR LSSNETLVNS
LCTISPYGPR EKQALLEAKT LEDRNQMLIA LTEKALRELT PGDATVQ
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