Gene Plav_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1304 
Symbol 
ID5455113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1439426 
End bp1439764 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content58% 
IMG OID640876874 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001412581 
Protein GI154251757 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.774193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.209326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCG TTATGGCGAT CATCAAGCCA TTCAAGCTGG ACGAAGTCCG TGAAGCGTTG 
ACCGCAATCG GCGTCCAGGG CCTGACCGTT ACCGAAGTGA AGGGCTACGG CCGTCAGAAG
GGTCAGACCG AAATCTATCG CGGCGCGGAA TACGCGGTGA ACTTCCTGCC AAAGCTCAAG
ATTGAAGTAG TCGTTGCGAC CGACCAGACC GACGCCGTGG TGTCCGCGAT CAGCGGCGCC
GCAAAGACGG GCCAGATCGG CGACGGCAAG ATTTTTGTAA TTTCCGTCGA GCAGGTGCTG
CGTATCCGCA CCGGCGAAAC GGACGCGGAA GCTCTTTGA
 
Protein sequence
MKLVMAIIKP FKLDEVREAL TAIGVQGLTV TEVKGYGRQK GQTEIYRGAE YAVNFLPKLK 
IEVVVATDQT DAVVSAISGA AKTGQIGDGK IFVISVEQVL RIRTGETDAE AL