| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1278 |
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| Symbol | holA |
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| ID | 5456579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1409971 |
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| End bp | 1411014 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876848 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_001412555 |
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| Protein GI | 154251731 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGATCA GCCCGAGAGA AGCGGACCGT TTTGCCACAA AGCCGGACCC GAAGGTCGTG
GCCGTTCTGG CCTATGGCCC GGACGCGGGA TTGGTCCGTG AACGGATCAA GATGCTGGCC
CGGACCGTGG TGGACGATCT CGCCGACCCT TTCCGCGTCG CCGAGCTTTC CGATACCGAC
CTGAAGCAGG ACCCGGCACG GCTTTCAGAC GAGGCGGCCG CAATCGCCAT GCTCGGCGGC
AGGCGCGTCG TGCGCGTGCG CGGCGCGGCC GACGCGACGG CGAAGATCTT CGAGAGTTTT
CTGGAAAACC CGGCAGGCGA CGCGCTGGTG CTGGTGGAGG CGGGCGAGCT TGGGCCGCGC
TCGTCGCTGC GCCTCCTGTT CGAGGGCGCC GCGAACGCAG CCGCCATTGC CTGTTATGCG
GATGATGCCG GCGTGCTGGA AAACGTCATC CGCACGCGGC TTGCAAACGA AGGACTGGTG
CCGGAACCCG CGGCGCTTGA ATATTTGCGC GATCATCTCG GTTCGGATCG CGGCGTGACG
CAGAACGAAC TCGAGAAACT CATTCTCTAT GCGGGCCCCG GCAAGCAGGG CGAGAAGCGC
GCCGTGACGC TGGACGATGC GCGCGCAAGC GTCGGCGACA ATGCGGGAAC GAGCCTCGAC
GATGTCATCG ACGCGGCAAT GGGCGGCGAT CTCGACGGGC TCGACGTGGC GCTCGCCCGC
GCCCGCGCGG CGGAGACAAA TGCCATCGCG ATCCTCAACG CGCTGTCGCG CCACCTCATG
CAGCTCCATC TCGCGACGGC GCGCATCGAG ACGGGGAGCG ATGTCGAGGG CGCGATCCGA
AGCTTCCGGC CGCCGGTTCA CTTCAGCCGT AAAAACGCCG TACAAAGACA AATGAAATTA
TGGAACCGGA AGCGCCTCGA CCGGGCCCTC GCCCTCGCCC TCGAAGCGGA GGGCCAGTGC
AAATCGAGCG GCCAGCCGGA CGTCGCGATC TGCGGCCAGA CGCTGCTCCG GATTGCGCAA
GGGGCGCGTG CGGCGAGGCG CTGA
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| Protein sequence | MKISPREADR FATKPDPKVV AVLAYGPDAG LVRERIKMLA RTVVDDLADP FRVAELSDTD
LKQDPARLSD EAAAIAMLGG RRVVRVRGAA DATAKIFESF LENPAGDALV LVEAGELGPR
SSLRLLFEGA ANAAAIACYA DDAGVLENVI RTRLANEGLV PEPAALEYLR DHLGSDRGVT
QNELEKLILY AGPGKQGEKR AVTLDDARAS VGDNAGTSLD DVIDAAMGGD LDGLDVALAR
ARAAETNAIA ILNALSRHLM QLHLATARIE TGSDVEGAIR SFRPPVHFSR KNAVQRQMKL
WNRKRLDRAL ALALEAEGQC KSSGQPDVAI CGQTLLRIAQ GARAARR
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