| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1078 |
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| Symbol | |
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| ID | 5457000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1182544 |
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| End bp | 1183695 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876648 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001412357 |
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| Protein GI | 154251533 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTCG ACGCTGAAAC ACGCGAACAA CTCATCTCTT CCGTCCGCCG CTTTGTCGAT
GAGCGCCTGC GTCCGATCGA GGATAAGGTC TCGGAATCCG ACAAGGTGCC GGACGAGATC
GTCGAGGAGA TGAAGGAACT CGGCCTTTTC GGTATTTCCG TGCCGGTCGA ATATGGCGGC
CTCGGCCTCA CCATGGAGGA GGAATGCCTC CTCATGTTCG AGCTGGGACG AACCTCACCC
GCGTTCCGTT CCGTTATCGG CACCAATGTC GGTATCGGCA GCCAGGGCAT TGTCATGCAT
GGCCGTCAGG ACCAAAAGGA ATACTGGCTG CCGAAGATCG CCAGCGGCGA AGTCATCGTC
AGTTTCGCCC TGACGGAGCC GGAGGCAGGC TCCGATGCTG CCTCCCTGAA AGCCACCGCC
ATCCGCGACG GCGACCACTA CATAGTCAAC GGCACCAAGC GCTACATCAC GAATGCGAAC
AAGGCTCATG CCTTCACGTT GCTCGCCCGC ACCGACCCGA AAACCCCGGG CGCAAAGGGC
GTCTCTGCCT TCATCGTACC TCGCGACATT CCCGGAATTC ATGTCGGCAA GCCCGAAAAG
AAAATGGGTC AGCAGGGCGC GCATATCTGC GATGTGATCT TCGAGGACGC GCGCATTCCC
GCTGATTGCC TGCTCGGCGA CACGGAGGGT AGGGGGTTTG TGACCGCCAT GCAGGTGCTG
GAGCGCGGCC GGCTTCACAT CTCGGCCGTT TGTATTGGCG TTGCCGACCG CCTCGTCGAG
GATTCGGTCA AGTATGCCGC GGAGCGCAAG CAGTTCGGTG CGCCCATTGG CAATCTCCAG
CTCGTGCAGG CCATGCTTGC GGATTCGAAG ATGGAAGCCT ATGCCGGCCG CTGCATGGTG
CTGGATGCTG CCCGCCGCCG CGACGCGGGC GAGGATGTCG CGACCGAAAG TTCCTGCTGT
AAACTCTTCT GCTCCGAAGC CGTCGGCCGC ATCGCCGATC GTGCCGTGCA GGTGCATGGT
GGTGCGGGCT ATGTTGCCGA CTACGGTATC GAACGCTTCT ACCGTGATGT TCGCATTTTC
CGTATCTACG AAGGAACCAG CCAGGTTCAG CAGGTCATTA TCGCGCGGAA CCTGCTGAAG
GCGGTGAGCT GA
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| Protein sequence | MALDAETREQ LISSVRRFVD ERLRPIEDKV SESDKVPDEI VEEMKELGLF GISVPVEYGG
LGLTMEEECL LMFELGRTSP AFRSVIGTNV GIGSQGIVMH GRQDQKEYWL PKIASGEVIV
SFALTEPEAG SDAASLKATA IRDGDHYIVN GTKRYITNAN KAHAFTLLAR TDPKTPGAKG
VSAFIVPRDI PGIHVGKPEK KMGQQGAHIC DVIFEDARIP ADCLLGDTEG RGFVTAMQVL
ERGRLHISAV CIGVADRLVE DSVKYAAERK QFGAPIGNLQ LVQAMLADSK MEAYAGRCMV
LDAARRRDAG EDVATESSCC KLFCSEAVGR IADRAVQVHG GAGYVADYGI ERFYRDVRIF
RIYEGTSQVQ QVIIARNLLK AVS
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