| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1022 |
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| Symbol | |
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| ID | 5456965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1118135 |
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| End bp | 1119871 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876592 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001412301 |
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| Protein GI | 154251477 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.251498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTAA TCATCAAGGG TGGCGAGATA GTCGACGGCA CCGGCGCACC GAAATTCCGC
GGCGATGTGG GCGTGAAGGA TGGCAAGATC GTTGCCGTCG GAAAGGTCGA AGGCACCGCC
AAATGTACGG TCGACGCCGA GGGCGCCGTC GTCACGCCCG GCTTCGTCGA TATCCACACA
CATTATGATG GCCAGGTCTC GTGGGATGCG ATGCTCGCAC CGTCTTCGAT CAACGGCGTC
ACCTCTACCG CCATGGGCAA TTGCGGCGTC GGCTTCGCCC CCGCGCGGGC CGACAAACAT
GATTTCCTGA TTCGCCTGCT GGAAGGCGTG GAGGACATCC CCGGCACCGC GCTTCATGAG
GGCCTCACCT GGGACTGGGA AAGCTTCCCC GACTATCTTG ACGCCATCTC GCGCCGAGCC
TACGCCATCG ACATCGGCGC GCATGTGCCC CACGCACCGC TCCGCACCTA TGTAATGGGG
GATCGCGGCG GCGACCATAC CGCCACGCCG ACCGCCGACG AGATCGAGCG TATGCGACAG
CTGACCTATG AAGCACTTCA GGCTGGCGCG CTAGGTTTCT CCACCACGCG CACGATGTTT
CATCGCACGA AGGACGGCCA AAATGTCGGC ACCCTGACAG CATCGGAAGA TGAACTTCTC
GGTATCACTC GCGCACTTGA TCAAGCCGGG AGAGGCGTGA TCCAGCTTAT CTCCGATGCC
TATCTCACCA ACGACGATGA ATTTGCGGCG CGCGAGCTCT CCCTCATCCG CTCGCTCGCC
GCGCAAACAG GTCGCAAGCT TTCCTTCACC GTTCAACAGA ACGACGACGC GCCTGACCGT
TGGCGTCAGA TCTTTCAAGA GATTGTTGGG ATGCGTGCCG CCGGCCTGGA CGTCAGCGCA
CAGGTCGCAC CACGCCCGAT CGGAGCCATC CTCTCTTTCT CCACGTCCAT GACCCCTTAC
ATTGCGTGCC CAACCTACAT CAAGCTCTCT GCAACGCTCC GAGGCGAGTC GCTTGTCGCG
GAGCTCAATA AGCCCGAGGT GAAGGCCCAG ATCCTTTCCG AGCACGCTAG AGTCGTGAAC
CTTACCGGCA ACGCCGGAGC AATCACAAAG GGCTACATGC GAATGTTCCG CATGAACGAC
CCTGTCGATT ACGAGCCGAG CGCCGAGAGC TCGCTCCAGG CCGAGGCTGA TCGCCTCGGT
CGCAACGTTG ACGACTATGT GTACGATACG TTTCTGGAAG ATGACGGCCA GCGGCTCATC
TACCTGCCAT TCAACAATTA TTCCTACGGT AATCTCGACG ATGTGTACGG TATGATGACG
GGGCCGCACG CGCTCTACGG GATCTCCGAT GGTGGCGCGC ATTGCGGCTT CATTTGCGAT
GCTTCCTTCC CGACGACAAC CATCGGGCTT TGGTCGAAAG GCTCGAAGTC GGGCTACCAG
ATACCGCTTG AGGCGCTGGT GCATGGCTAT ACCCAGCGCA ATGCCCGCCA TGTCGGCTGG
CACGACCGCG GCGCGATAAA GGTCGGCCAG CTCGCCGATC TCAACGTTAT CGATCTAGGC
AAACTCTCGC TCAGCCCGCC GGAGATAGTG CGGGACCTGC CCGCCGGCGG AACGCGCCTG
CTGCAGACCG CAAAGGGTTA TCGCCAGACG ATCAAGTCGG GCGTCGTGAC TTTCGAGGAT
GGCAAATGGA CCGGCGAAAC TCCCGGGAAG CTCGTACGCG GCGAACAGTT CGCATAA
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| Protein sequence | MDLIIKGGEI VDGTGAPKFR GDVGVKDGKI VAVGKVEGTA KCTVDAEGAV VTPGFVDIHT
HYDGQVSWDA MLAPSSINGV TSTAMGNCGV GFAPARADKH DFLIRLLEGV EDIPGTALHE
GLTWDWESFP DYLDAISRRA YAIDIGAHVP HAPLRTYVMG DRGGDHTATP TADEIERMRQ
LTYEALQAGA LGFSTTRTMF HRTKDGQNVG TLTASEDELL GITRALDQAG RGVIQLISDA
YLTNDDEFAA RELSLIRSLA AQTGRKLSFT VQQNDDAPDR WRQIFQEIVG MRAAGLDVSA
QVAPRPIGAI LSFSTSMTPY IACPTYIKLS ATLRGESLVA ELNKPEVKAQ ILSEHARVVN
LTGNAGAITK GYMRMFRMND PVDYEPSAES SLQAEADRLG RNVDDYVYDT FLEDDGQRLI
YLPFNNYSYG NLDDVYGMMT GPHALYGISD GGAHCGFICD ASFPTTTIGL WSKGSKSGYQ
IPLEALVHGY TQRNARHVGW HDRGAIKVGQ LADLNVIDLG KLSLSPPEIV RDLPAGGTRL
LQTAKGYRQT IKSGVVTFED GKWTGETPGK LVRGEQFA
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