Gene Plav_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0962 
Symbol 
ID5456956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1041139 
End bp1041636 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID640876533 
ProductMarR family transcriptional regulator 
Protein accessionYP_001412242 
Protein GI154251418 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.100112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCA AAAACAGGAA AGCCGTTCCC GACAGGGAAT TCGGCTGGCT TCACCGCGAT 
GTGTTCCGGC TCTTCAAGCG CGCCTGGGAA AACCGCCTGC GCGCCTCGGG CACCGGCATC
ACCATGCCGC AATCCCGGGT TTTCGCGGAA TTGCGCCAGC AGGATGGCGT CACCCAGACG
GAGCTGGCCG ATCTTGTGAT GATGGAAAAG GCGCCGCTCG GCCGCCTGCT GGACCGGATG
GAGGAACTGG GCCTCATCAC GCGCCGCCCG GACCCGGCAG ACCGCCGCGT CCGCCGCGTC
TATCTCACCG ATGCCATCGA CGGCTTTCAC GACGAATTGT GGGACGCCGC CTTCGGCATG
TTCGGCGACG CCCTCAAGGG CTTCACGGCG GAAGAATACG AAACCCTCGT CGCCATGCTC
CGCCGCATCA AGGAAAACCT CGAAGCCGTG GAGCGGAATA CGCCGCAGGA AGAAAGCGCC
AGCCGCGCCG ATGCTTGA
 
Protein sequence
MAGKNRKAVP DREFGWLHRD VFRLFKRAWE NRLRASGTGI TMPQSRVFAE LRQQDGVTQT 
ELADLVMMEK APLGRLLDRM EELGLITRRP DPADRRVRRV YLTDAIDGFH DELWDAAFGM
FGDALKGFTA EEYETLVAML RRIKENLEAV ERNTPQEESA SRADA