| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0960 |
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| Symbol | |
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| ID | 5455595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1036695 |
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| End bp | 1039838 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876531 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001412240 |
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| Protein GI | 154251416 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATTT CCGACATCTC GATCCGCCGC CCGGTTTTCG CGGTGATGAT CATCGCGGCG
CTGGTCGTGC TCGGCTGGAT ATCGCTCGGG CGCGTGGGCG TCGATCTCTT TCCCAAGGTG
GAGTTTCCGG TTGTCGCGGT GACGACGGTG CTGGAAGGCG CCTCGCCCGA GGCGATCGAA
AGCGACGTGA CGGACGCGAT CGAGGAGCAG GTCAACACGA TCTCGGGCAT CGAGACGCTT
TCCTCGACGA GCGCGGAGGG GCTCTCCCAG GTCGTCATCC AGTACGACCT CAACGAGAAT
GTCGACGTGA AGGCGCAGGA TGTGCGCGAC AAGGTTTCGC TGGCGCGGCC GAACATTCCG
CAGGATGCCG AACAATCCAT CGTGCAGAAG GTGGACCCGG ACGCACAGGC CATCATGTCG
ATCATGATTG CCGGCGACCT GCCGATCCGC GATCTCACGC AATTCGCCGA CAAGGTGGTG
AAGGAGCGGC TGCAGCGCAT ATCGGGCGTC GGCTCCATCG AGCTTGTCGG CGGACGCGAC
CGCGAGGTGC GCATCTGGCT CGACGCGGTG AAGATGCGCG CCTATGGCGT GGCGGCGGAA
GACGTGACCT CGGCGCTGCG CCGCGAACAT GCGGAAATTC CGGGCGGACG GCTGGAGACG
CCGGGCGGCA TGTCGGAATT TTCGGTGAAG ACCAAGGGCG AGGTCACGAG CGTTGCCGAT
TTCCGCAATA TTCTCGTCGC CTTCCGGCAG GACGGCGCAC CGACGACCAT CGGCGACATC
GCACGGGTGG AAGACGGGAT GGAGGACGAA CGCTCCTATG CGGAACTCAA CGGCAAGCGC
GGCGTGTCGC TCGACCTGCG CAAGCAATCC GGCCGCAACA CGGTGGAAGT GGCGCGCGCG
GTGCGCGAGG AGCTGAAGGA AATCGAGAAG CTGGCGCCTG CCGGCATCGA GATGAAGACG
GCGCGAGACA CGGCGGTCTT CATCGAGGGA TCGGCGGATG ACGTGTTCTT CGACATCCAG
CTCGGTATTG TGCTGGTGGT GCTTGTCACC CTCGCCTTCC TGCTTTCGAT GCGCGCGACG
CTGATCGTCG CCGTCGCCAT GCCGACATCG CTCGTCGCGA CGTTCTTTGC TTTCTATGTG
GCGGATTTCA CCATCAACAT GATGACGCTG ATGGCGCTGT CGCTTGCCGT CGGACTGCTG
GTGGACGATG CCATCGTGGT GCTGGAAAGC ATCTACCGGA AGCTCGAGGA AGGATTGCCG
CCGATGCAGG CGGCATCGGA AGGCACCAAG GAAGTGGGGC TTGCGGTGCT GGCCGCCACC
TTCTCGATCT GCGCGGTGTT TGTGCCTATC GCGTTCATGG ACGGCGTTGT CGGACGGTTC
TTCTTTCAAT ACGGGCTTGC AATCACCTTT TCGGTGCTGG TGTCGCTTCT CGTGTCGCTG
ACGCTGACGC CGATGCTGTC GTCGCGGATG CTGAAGCATG GCGAGACGGA CCCGGCGAAC
TACAACCGCG TGGCGCGCTT TTTCGACGAT GGCTATAACC GGCTCGATCG CTTTTACGGG
CGGGTGCTGG AATGGGCGCT TGGCGCGCGG TGGATGGTGA TGGTCGGCGC GGCGCTCACC
ATCGTTTTCG CAGTGGTGGT GGCGCGGTCG CTGCCGATGG CTTTCGACTC GCGAGCGGAC
CGGGCGGAAT TTCTCGCGAC CGTCGAACTG CCGTTCGGCG CGGGGCTGGA AGAGACGCGG
GCCGTATCCT CGCGCGTCGC TCATGCGATT TCCGGCGTGC GGCATGTGCA TACGGTGTTC
TTCACCATCG CTTCCGACCC GCAGAAGAGC GTCAACAAGG CGTTCTTCTA TGTCGGACTG
ACGGCGAAGG CGGAACGCGA CGAGAGCTTC ATTCCGATCA TGGACGCGGC GCGCGTGGCG
ATGCTCAAGG CGGCGCCGGA GGCAAAGCAT ATTTCGCTTT CCGACGTGCC GTGGATTTCC
GGCGGCGGCT TTTCCGACTA TGCGATGCAA TATGTGGTGC AGGGGCCGGA CCTTGCGGTG
TTGGAGGCGA AGGCCAATGA AGTGGTGGCG CGGATGCGCA CAAGCCCGCT CTTCGCCGAC
GCCAAGACGA GCTACGATTC CGGCAAGCCC GAAGTGCAGG TGCATGTGGA CCGGCGACGA
GCGGCGGACC TCGGCGTGCC TGTGCGCTCG CTCGCGGAAA CGATGCGCGC GATGGTGGGC
GGCGTGAAGG CAGGGACGTT CGAGGAATTC GGCCAGCGAT ACGATGTGCG CGTGCGGCTG
GAGGATGGGC AGCGCGACGA CATATCGAAG CTCACCATGA TCCAGGTGCG CTCGGCAAAC
GGCAACCTGA TCGACATTGC CAATGTGGCG CGCTTCGACG TGGCGGCAGG GCCGGCGCAG
ATCGAGCGGC AGAACCGGGC CCGGCGCATC GCCATAGTCG CGAACAACCC GGAAGGCGCG
GCGCTTGGCC CGGCTTCCGA AGAGATCGAG ACCTATCTCG AAGATCTGAA ACTTCCGCCC
GGCTATTCAT GGAGCGCGGA GGGCCGCTCG AAGCGGATGA AGGAGACGGG CGCGGCCATC
GGCTTTGCGT TCCTGCTGGC GCTGATCGCG CTCTACATGA TCCTGGCGAG CCAGTTCAAC
AGTTTCGCGC AACCGGCGAT CATCATGCTG TCGGCGCCGC TTTCCTTTGC GGGGGCGTTC
GTGGCGCTGA AAATATCCGG GCAGGAGATG ACGATGTTCA GCCAGATCGC GCTTTTGGCG
CTGATGGGGC TGGTGATGAA GAACGGCATT CTGCTGGTCG ACTACACGAA CCATCTGCGC
GAAGCGGGCG CGGGGCCGCG CGAGGCGGCA CTGAAGGCGG GGCCAGTGCG GCTCCGGCCC
GTGCTGATGA CGCAGATCGC AACCGTCTTC GGGCTGATCC CGGTGGCGAT GTCGAACAGC
CAGGGCGCGG AGTTCCGCAA CGCCATGGGC ATTCTCGTGA TCGGCGGGCT CATTTCCTCG
ACGGTGCTGA CGCTCGTCGT CGTGCCGGTC GCCTATACGC TGATGGAGGA TGCGCGGGGG
AAGGTGGCAG GGATCGGCGG GTCATTCCGG CGGCTCGAGC GACGGTTCGG CATCGGCAAG
GCGCCGGGGG CGCCGGCGGA ATAA
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| Protein sequence | MWISDISIRR PVFAVMIIAA LVVLGWISLG RVGVDLFPKV EFPVVAVTTV LEGASPEAIE
SDVTDAIEEQ VNTISGIETL SSTSAEGLSQ VVIQYDLNEN VDVKAQDVRD KVSLARPNIP
QDAEQSIVQK VDPDAQAIMS IMIAGDLPIR DLTQFADKVV KERLQRISGV GSIELVGGRD
REVRIWLDAV KMRAYGVAAE DVTSALRREH AEIPGGRLET PGGMSEFSVK TKGEVTSVAD
FRNILVAFRQ DGAPTTIGDI ARVEDGMEDE RSYAELNGKR GVSLDLRKQS GRNTVEVARA
VREELKEIEK LAPAGIEMKT ARDTAVFIEG SADDVFFDIQ LGIVLVVLVT LAFLLSMRAT
LIVAVAMPTS LVATFFAFYV ADFTINMMTL MALSLAVGLL VDDAIVVLES IYRKLEEGLP
PMQAASEGTK EVGLAVLAAT FSICAVFVPI AFMDGVVGRF FFQYGLAITF SVLVSLLVSL
TLTPMLSSRM LKHGETDPAN YNRVARFFDD GYNRLDRFYG RVLEWALGAR WMVMVGAALT
IVFAVVVARS LPMAFDSRAD RAEFLATVEL PFGAGLEETR AVSSRVAHAI SGVRHVHTVF
FTIASDPQKS VNKAFFYVGL TAKAERDESF IPIMDAARVA MLKAAPEAKH ISLSDVPWIS
GGGFSDYAMQ YVVQGPDLAV LEAKANEVVA RMRTSPLFAD AKTSYDSGKP EVQVHVDRRR
AADLGVPVRS LAETMRAMVG GVKAGTFEEF GQRYDVRVRL EDGQRDDISK LTMIQVRSAN
GNLIDIANVA RFDVAAGPAQ IERQNRARRI AIVANNPEGA ALGPASEEIE TYLEDLKLPP
GYSWSAEGRS KRMKETGAAI GFAFLLALIA LYMILASQFN SFAQPAIIML SAPLSFAGAF
VALKISGQEM TMFSQIALLA LMGLVMKNGI LLVDYTNHLR EAGAGPREAA LKAGPVRLRP
VLMTQIATVF GLIPVAMSNS QGAEFRNAMG ILVIGGLISS TVLTLVVVPV AYTLMEDARG
KVAGIGGSFR RLERRFGIGK APGAPAE
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