Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0833 |
Symbol | |
ID | 5455982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 905988 |
End bp | 907958 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640876404 |
Product | hypothetical protein |
Protein accession | YP_001412113 |
Protein GI | 154251289 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.982432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTGC CGAGGCTCGG AATTGAAGGC GAGTGGTTTC AGGGAACGGA TGGCCGCAAG CGCATCCTGC GTGGCGTCAA TCTTGGCGGC GACTGCAAGG TGCCATATGC GCCGAACGGC CACACAAATA TCCCGACCGA TTTTTCCGAT CACCGCACCG TCTCCTTCGT CGGCCGTCCC TTTCCCCTCG CGGAAGCGGA TGAACATTTC TCCCGCCTCA AGGCATGGGG CTTCAACTGC CTCCGCCTGC TGACCACATG GGAAGCGGTC GAACATGAAG GCCCCGGCCG CTACGACGAG GCCTATCTCG ACTATTTCGC CGAACTCTGC CGCAAGGCCG ACGATTACGG CCTCTATGTC TTCGTCGATT TCCATCAGGA TGTCTGGAGC CGCATGACAG GCGGCGACGG CGCCCCCGGC TGGCTCTTCG ACGCGGTCGG CCTCGACTTC ACGAAGTTCC ATGCCGCCGG CGCGGCGCAT GTCATGCAAT ACAAATACGA CTTCGCGAAA GGCGGCCGCC AGGAAGAAAA CTACCCGACC ATGACCTGGT CGCAGAATTA CAAATACCCC GCCAACGCGA TCATGTGGAC GCTCTTCTTC GCCGGCAACA CCTTCTGCCC GGACTTTCTC GTGCAGGGCC GCCCCGCGCA GGATTTCCTT CAGGAGCATT ATCTCGGCGC GATGGAAGCC GTCGCACGCC GCGTGAAAGA CCTGTCCAAC GTCATCGGCT TCGACTCGCT GAACGAGCCG GGCTCAGGCT ATGTCGGCCA GTGGCTGAGC TACCGGCACA CAGGCCCCAG CGAGAAAAAC CCCATGCCCG CGCGTCCCGG CCTCGCCTGG TCGCCGCTTG ACGGTTTCGC CGCCGCGCGC GGTCTCGCCC GCGAACTCCC GGAAATGCAT ATCGACTGGG AGCAGCGCGC CGTCGTGAAG AAGCGCGACG TGCTGGTGAA CGGCGATGGC GTCTCGATCT GGAAGCAGGG CCGCCATTGC CCCTTCGAGC GCGCAGGCGT CTACCGCATC AATGGCGGCG AGATCGAAGC CATGGATGAA AAATTCTTCC GCGAGCGCAA CGGCCGCAGA TTTGAAATGG AAAAGGATTT CATGGGCCCG TTCTTCGCCC GTGTCGCGGA GCGCGTGCGT GCCGTCAACA ATGACTGGCT GCTCTTCGCC GAGCTCGATC CCGGCGCCGG CCTCGGCCAC GGCTTCCCGC CCGACACGCC CGAGCGCACG GTCAATGCCA GCCACTGGTA CGACATCGTC ACGCTCTCGA CCAAGCGGTT CGACTTCCCC GTGAAGATCA ATCCCTATAC CGGCCGCACC ACCGAAGGCG CGGAAGCGAT CGAAGCCTCC TACACGCGCC AGCTCGGCCG CCTGAAGGAT GCCTCGCACG CATTGAACGG CGGCACGGGC GCACCGGCCC TTCTCGGCGA ATTCGGCATC CCCTTCGATC TCGACAATGC CGCCGCCTAC AAGGCGTGGA AAGCGGGCGA CCGCACGGAT GCGCCTTGGG AAAAACACAT CATCGCCCTC GACCTCATGT ACAACGCGCT CGACCAGTTG CTCATGCACT CGACGCAATG GAACTACACC GCGTCGAACC GCAACGATCA GGCGGTGGGC GATGGCTGGA ACCAGGAAGA CCTCTCGATC TACAGCATCG ACCAGCGCGT CGACCCGTCG GATGTGAACA GCGGCGGCCG CGCGCTTGCC GGCTTCGTCA GGCCTTATGC CCGCGCCGTC GCGGGCCGCC CCTTGAAGAT GAAGTTCAAG CGCGAGACCG GCGCCTTCCG TTTCATCTAT CAGGCGGAAG GCGAGGGCGA GACGGAAATC TTCGTACCGA ACCTGCAATA TCCGAATGGC TATGACGTCG AAGTCGAAGG CGGCACCGTC ACCCGCGATG AGGAAAACCA GTGCCTCCGC GTCCATGCCG TCGGGTCCGA CAAGGTCGGC GTCATGATCA CGAGGCGGTA G
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Protein sequence | MALPRLGIEG EWFQGTDGRK RILRGVNLGG DCKVPYAPNG HTNIPTDFSD HRTVSFVGRP FPLAEADEHF SRLKAWGFNC LRLLTTWEAV EHEGPGRYDE AYLDYFAELC RKADDYGLYV FVDFHQDVWS RMTGGDGAPG WLFDAVGLDF TKFHAAGAAH VMQYKYDFAK GGRQEENYPT MTWSQNYKYP ANAIMWTLFF AGNTFCPDFL VQGRPAQDFL QEHYLGAMEA VARRVKDLSN VIGFDSLNEP GSGYVGQWLS YRHTGPSEKN PMPARPGLAW SPLDGFAAAR GLARELPEMH IDWEQRAVVK KRDVLVNGDG VSIWKQGRHC PFERAGVYRI NGGEIEAMDE KFFRERNGRR FEMEKDFMGP FFARVAERVR AVNNDWLLFA ELDPGAGLGH GFPPDTPERT VNASHWYDIV TLSTKRFDFP VKINPYTGRT TEGAEAIEAS YTRQLGRLKD ASHALNGGTG APALLGEFGI PFDLDNAAAY KAWKAGDRTD APWEKHIIAL DLMYNALDQL LMHSTQWNYT ASNRNDQAVG DGWNQEDLSI YSIDQRVDPS DVNSGGRALA GFVRPYARAV AGRPLKMKFK RETGAFRFIY QAEGEGETEI FVPNLQYPNG YDVEVEGGTV TRDEENQCLR VHAVGSDKVG VMITRR
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