| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0823 |
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| Symbol | |
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| ID | 5454133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 894766 |
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| End bp | 895788 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876394 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001412103 |
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| Protein GI | 154251279 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.895804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTA CGGCCCTCAT CCTCGGCGCG ACAGGCGGCT TCGGCGGCGA AACGGCGCTG
GCGCTCCACC GCCACGGCTG GCAGATCCGT GCTCTTCACC GCAATCCGAA GGCCGCCGCC
CGCGCCCTGT CCGACATGCC CTTCATCGAC TGGGTGAAGG GCGATGCCAT GAGCGCCGGA
GACGTCCGCG CCGCCCCCGT GAATGTCGAT GTGATCGTCC ATGCCGTGAA CCCGCCCGGC
TACCGCAACT GGGGCAGCAC CGTCCTCCCC ATGATCGGCA ACACGATCGC CGCCGCCAGG
GAAGCGGGCG CGCGCATCGT CTTCCCCGGC ACCGTCTATA ATTTCGGGCC GGATGCCTTT
CCGCTTCTCG CCGAAACCTC GCCGCAAAAT CCGAAGACGC GCAAAGGCGC CCTCCGCGTC
GAGATGGAAC GCCGCCTCCG CGCCGCCTCG GAAGAGGGCG TGCCCGTGCT GGTCCTGCGC
GGAGGCGATT TCTTCGGCGG CTGCAATCCC GGCAACAACT GGTTCGCGCA GGGCCTCGTG
ACGCCCGGCA AGCCGCTCCG CTCCGTCAGC TATCCGGGGC CGCACAAGGT CGGCCACAAC
TGGGCCTATC TGCCGGACAT GGCGGAGACG GTCGCGCGGC TGCTGTTGCG CGCGGATGAG
CTGAAGCCCT TCGAGGTCTT CCACTTCGGC GGCCATTGGC TTGAGCAAGG CATCGAGATG
GCGGACGCCG TCCGCTTCGC TGCCCGCAAG CCGGACCTCC CCGTGAAGCG CCTCCCCTGG
TTCGCGCTCA CGGTTCTCTC GCCCTTCGTC GAGACGTTCC GCGAGATGCG CGAGATGCGC
TACCTCTGGA AAAAACCCGT GAAGCTCGAC AATGCGAAAC TCGTCGCCTT CCTCGGCCAC
GAGCCCCACA CGCCCCTCGA CATCGCCGTC CGCACGACGC TTGCCGGCCT CGGCTGTATC
GACATGGCGG ACACCTCCTC CCGTCCCGCA AGCCTCTCCC TCACAGAAGG AACGATCCGA
TGA
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| Protein sequence | MTSTALILGA TGGFGGETAL ALHRHGWQIR ALHRNPKAAA RALSDMPFID WVKGDAMSAG
DVRAAPVNVD VIVHAVNPPG YRNWGSTVLP MIGNTIAAAR EAGARIVFPG TVYNFGPDAF
PLLAETSPQN PKTRKGALRV EMERRLRAAS EEGVPVLVLR GGDFFGGCNP GNNWFAQGLV
TPGKPLRSVS YPGPHKVGHN WAYLPDMAET VARLLLRADE LKPFEVFHFG GHWLEQGIEM
ADAVRFAARK PDLPVKRLPW FALTVLSPFV ETFREMREMR YLWKKPVKLD NAKLVAFLGH
EPHTPLDIAV RTTLAGLGCI DMADTSSRPA SLSLTEGTIR
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