Gene Plav_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0738 
Symbol 
ID5453958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp803843 
End bp804655 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID640876307 
Productdienelactone hydrolase 
Protein accessionYP_001412018 
Protein GI154251194 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.303831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.797206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA TAATTATGAC ACTCGCCGCT TTGACGGTGG CGGGCGGCCT GGTCACGGAG 
GTTCGGGCCG AGACGCGGGA TTTCACCGTC GATGTTTCCG ACTACGCAGC CGAGCGCGAG
CTGGAGATCG ATGTGGAACT GTCTCTTCCC GCCGGGCGGA AGACCTGGCC GGTCGTCTTC
GTGCTGCATG GTTGCGATGG CATAACCCGG TTTTCAGCGC CTACGCTGAA AAAGCGGGCG
GCGTTTTACA GGGACCGTGG TTTCGCTACC GTCATACTCG ATAGCTGGCG CCCGCGCGGG
ATCGACAATG TGTGCACGCC CGGCGCCGCC GACACCGCCC TTTATCTCGA TCCGGTAAAC
CGCATCTCCG ACATCGAGGC CGTCACTTCT CACATCGCGA CGCTTGACGG CTTCGACGGC
CGGATTGTGG TGGATGGATT GAGCCATGGC GGATGGACGG CGCTCAGCAT CCTGTCGTCT
CCGGGCGATG AACCGCTTCA GGCCGAGGTC GCCGGTATCG TCGTCTGGTA TCCGCCATGC
GGCATCGTGG ACGCTACGCA TCGGACACCG ACGCTGATCT TCTCGGGCGG AAAGGACGCA
CACCCGGCAA TCAATCCGCA GGCTTGCGTC GAAGAAGGAG AGCGTTACGG CTGGGTTGAA
ACCGTTCTCT TCAAGAATGC CACCCACGCC TTCGACTATT CCTATACCGG CCCGTCCGGC
GGCCCCTCGG GCTTCATCCG CCACGATGCG CAGGCGACGC ATGAAGCCTA TCTCCGGCTG
GAGGACTGGC TGAAAGAACA AGGCCTGCCG TAA
 
Protein sequence
MKRIIMTLAA LTVAGGLVTE VRAETRDFTV DVSDYAAERE LEIDVELSLP AGRKTWPVVF 
VLHGCDGITR FSAPTLKKRA AFYRDRGFAT VILDSWRPRG IDNVCTPGAA DTALYLDPVN
RISDIEAVTS HIATLDGFDG RIVVDGLSHG GWTALSILSS PGDEPLQAEV AGIVVWYPPC
GIVDATHRTP TLIFSGGKDA HPAINPQACV EEGERYGWVE TVLFKNATHA FDYSYTGPSG
GPSGFIRHDA QATHEAYLRL EDWLKEQGLP