Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0637 |
Symbol | |
ID | 5453984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 700512 |
End bp | 702038 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640876206 |
Product | UbiD family decarboxylase |
Protein accession | YP_001411917 |
Protein GI | 154251093 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTACG CCTCCCTCCG CGAATTCCTT TCAATGCTCG ATGCCAGCGG CGACCTCGCG CGGGTGAAGG AACCTGTTTC GACCGTTCTG GAGATGACCG AGATCCAGAC CCGCCTGCTG GCCGAGCAGG GGCCGGCGGT CCTTTTCGAG CAGGCGCAGA TGGCCGATGG CCGCCCCTCG CCCATGCCGG TACTGGTGAA CCTGTTCGGC ACCGTGGAGC GGGTGGCGCG CGGCGTCACC ATGGGCGGCA TCGAGCGCCG CCATGCGAAG GATCTCCGCG AGGTCGGCGA GGCTCTTGCC TTCCTCCGCC AGCCGGAGCC GCCGGGAGGC TTTCGTGAGG CCATATCCAT GCTGCCGCTG CTCCGCACGG TCATGGCGAT GAAGCCGAAG ACGGTCTCTT CCGCGCCCTG CCAGGAGGTC GTGCTGAAGG GCAGCGACAT CAACCTCAAC GATCTGCCGA TCCAGACCTG CTGGCCGGGC GAGCCCGCAC CACTCATCAC CTGGCCGCTC GTCGTGACCA AAGGGCCGAA GGGCACGAAG GAAGACGATT TCAACCTCGG CATCTACCGG ATGCAGGTGC TCGGCCCGAA CAAGACGATC ATGCGCTGGC TGGCGCATCG CGGCGGCGCG CAGCATCACG CGCGCTGGAA GAAGGAAAAG CGTGAGCCGC TTCCGGCCGC CTGCGTCATC GGTGCCGATC CCGGCACCAT CCTCGCCGCT GTCACGCCCG TTCCCGACAC GCTGTCGGAA TACCAGTTCG CGGGCCTCCT GCGGGGGCAA AAGGTCGAGC TCGTCGATTG CAAGACAGTG CCGCTGAAGG TGCCGGCCGA GGCCGAAATC GTCATCGAGG GCCATGTCTC GCTCGACGAT TACGAAGACG AAGGCCCTTA CGGCGACCAC ACCGGCTATT ACAATTCGGT AGAGAAATTC CCCACCTTCA CCGTCTCCGC GATCACTATG CGGAAGGACC CGATCTATCT CTCGACCTTC ACCGGCCGCC CGCCGGACGA GCCTTCCGTG CTCGGCGAGG CACTGAACGA GGTCTTCATT CCACTGTTGC AGCAGCAGTT CCCGGAGATA ACGGATTTCT GGCTGCCGCC CGAAGGCTGC TCCTACCGCA TCGCCGTCAT TTCGATGAAG AAGGCCTATC CCGGTCACGC CAAGCGCGTG ATGATGGGCG CATGGTCCTA TCTGCGTCAG TTCATGTATA CGAAATGGAT CATCGTGGTG GATGACGACA TCAACGCGCG CGACTGGAAG GACGTCATGT GGGCGATCAG CACACGGATG GACCCGGTGC GCGACGTGAC ACTGGTCGAG CACACGCCGA TCGACTATCT CGACTTCGCC TCGCCCGAAA GCGGCCTCGG CGGCAAGATC GGCCTCGACG CGACGAACAA ATGGCCGCCC GAAACAAAGC GTGAATGGGG CCGCCAGATC CGCATGGACC AGGACGTCAT CGACACGGTA ACGAACAAAT GGTCGAAGCT CGGCCTGCCG GGCACGGGCA AGCCGATCTG GAAGTGA
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Protein sequence | MSYASLREFL SMLDASGDLA RVKEPVSTVL EMTEIQTRLL AEQGPAVLFE QAQMADGRPS PMPVLVNLFG TVERVARGVT MGGIERRHAK DLREVGEALA FLRQPEPPGG FREAISMLPL LRTVMAMKPK TVSSAPCQEV VLKGSDINLN DLPIQTCWPG EPAPLITWPL VVTKGPKGTK EDDFNLGIYR MQVLGPNKTI MRWLAHRGGA QHHARWKKEK REPLPAACVI GADPGTILAA VTPVPDTLSE YQFAGLLRGQ KVELVDCKTV PLKVPAEAEI VIEGHVSLDD YEDEGPYGDH TGYYNSVEKF PTFTVSAITM RKDPIYLSTF TGRPPDEPSV LGEALNEVFI PLLQQQFPEI TDFWLPPEGC SYRIAVISMK KAYPGHAKRV MMGAWSYLRQ FMYTKWIIVV DDDINARDWK DVMWAISTRM DPVRDVTLVE HTPIDYLDFA SPESGLGGKI GLDATNKWPP ETKREWGRQI RMDQDVIDTV TNKWSKLGLP GTGKPIWK
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