| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0609 |
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| Symbol | |
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| ID | 5454286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 674449 |
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| End bp | 675630 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876178 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001411889 |
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| Protein GI | 154251065 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.172762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCT CATTCTCCGC AAAGGACGAA GAGTTTCGCA TGAAGGTGCG GGACTTTTTC
GAGCACGAGT ATCCGCGCGA GATCGTGGAG AAGATGGCGA GCGGCGCTTC ACCGACCAAG
GCCGACTACC AGAAATCGGA GCGAGCCTTT GCTGCGCGTG GCTGGCTTGC CGTCAACTGG
CCGAAATCGG CAGGCGGCAC GGGCTGGAGC GCGAACGAGA AATACATCTT CGACGAGGAG
CTTGAGCGCG CGGGCGCGCT CAATGTCGTG CCGATGGGCC TCCTCTATGT CGGTCCCGTC
ATCTACACAT TCGGCACGGA CGAACAGAAG AAGCGCTGGC TGCCCGGCAT TCTCGACAGC
ACGACCTTCT GGGCGCAGGG CTATTCGGAG CCCGGCTCCG GCTCCGACCT GGCCTCGCTG
CAGGCGAGCG CCGTTGTAGA TGGCGACGAC TACATCGTCA ACGGCACCAA GATCTGGACC
AGCCTCGCTC AGCATGCCGA CTGGATTTTC TGCCTGCTGC GCACCAGCCA GGAAGAGAAG
AAGCAGGAAG GCATCACCTT CCTGCTGATC GACATGACAA CGCCGGGCAT CACCGTGCAG
CCGATCATCA CCATCGACGG CAAGCATTCG CTCAACAGCG TCACCTTCGA AAATGTGCGC
GTGCCGCAGG AAAACCGCAT CGGCGAAGAG GGCAAGGGCT GGACCTATGC CAACTACCTG
CTCGGCCATG AGCGCACCTC CTATGCCCAT GTCGCGGGCA AGCGGAAGCA GCTCCGCAAC
ATTCGCGAAG CCGCGCGCGA ACGCGGACTG CTGGCCGACC CCGCCTTCAT CCGCAAGCTC
GGCGAACTCG AAACGCGGCT CGATACGCTT GAAATAACGG TGCTCCGCAC GCTCTCCTCA
GTGGCGGAAG GCGGCGCGCC GGGCAACGAA TCCTCGATCC TGAAAGTGAT CGCGACCGAA
CTCGCACAGG ACATCACGGA GCTCGGCGCC GAGACCTACG GCCCCTATGT GCAACCGGCC
TTCCCGGATT CCGTCGCCCC CGCATGGACC GGCAACACGG CGCTCCCCGC GGGCGCGGCG
CCCGCCGTCG CCGCCTATCT CGGTGCCCGC GCGCAGTCGA TTTATGGCGG CTCCAACGAA
ATCCAGAAGA ACATCATCGC CAAGCGGATA CTGGGTCTTT GA
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| Protein sequence | MDFSFSAKDE EFRMKVRDFF EHEYPREIVE KMASGASPTK ADYQKSERAF AARGWLAVNW
PKSAGGTGWS ANEKYIFDEE LERAGALNVV PMGLLYVGPV IYTFGTDEQK KRWLPGILDS
TTFWAQGYSE PGSGSDLASL QASAVVDGDD YIVNGTKIWT SLAQHADWIF CLLRTSQEEK
KQEGITFLLI DMTTPGITVQ PIITIDGKHS LNSVTFENVR VPQENRIGEE GKGWTYANYL
LGHERTSYAH VAGKRKQLRN IREAARERGL LADPAFIRKL GELETRLDTL EITVLRTLSS
VAEGGAPGNE SSILKVIATE LAQDITELGA ETYGPYVQPA FPDSVAPAWT GNTALPAGAA
PAVAAYLGAR AQSIYGGSNE IQKNIIAKRI LGL
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