| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0588 |
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| Symbol | |
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| ID | 5455773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 645816 |
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| End bp | 646610 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876157 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001411868 |
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| Protein GI | 154251044 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.377951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATGC ACACTCAACC CGTCGGCGAC CTCCTGCGCG AGTGGCGCCA GCGCCGCCGC
CTCAGCCAGC TTGCCTTCGC CTGCGACGCG GAGATTTCCG CGCGCCATTT GAGCTTCCTC
GAAACCGGCC GCTCGCGCCC AAGCCGCCAG ATGCTGCTGC ATCTCGCCGA TCTTCTGGAA
GTGCCGTTCC GCGAGCGCAA TTCGCTGCTG CTCGCGGCTG GCTACGCGCC GGTCTATTCG
GAAACGCGGC TCGACAGTCC GGATGCCGCC GCCGCGCGTC GCGCGGTCGA CCTCGTGCTC
GCGTCGCATG AGCCCTTTCC CGCCCTCGCC GTCGACCGGC ACTGGCATCT CGTCGCGGCG
AACCGCGCCG TTCCGCTCTT CCTTGCGGGC ATACCGGAGG AGCTGCTTCA GCCGCCGATC
AACGTGCTGC GCCTCAGCCT GCATCCGCAA GGGCTTGGCT CCCGCATCGA AAATCTCGGC
GAGTGGCGCG CGCATGTCTT CATGCGGCTT CAACATCAGA TCGACCTGAC GAATGACGAA
GGGCTGATCG CGCTGGTGAA GGAACTTGAA ACCTATCCGG GCGGATTGAA GCCGCGCGAA
AACCACGAGG CCGAATTCGG CGGGCTCATC GTGCCGCTGA AACTCAAAAG CGATGCCGGC
ACGCTTTCCT TCTTCACCGC TACCACCGTC TTCGGCACCG CCGTCGACAT CACCTTCTCG
GAACTCATCA TCGAATCCTT CATGCCCGGC GACGCCTTCA CCGCCGCCGC CGTGCGCGAG
GCGATGGGGG AATAG
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| Protein sequence | MKMHTQPVGD LLREWRQRRR LSQLAFACDA EISARHLSFL ETGRSRPSRQ MLLHLADLLE
VPFRERNSLL LAAGYAPVYS ETRLDSPDAA AARRAVDLVL ASHEPFPALA VDRHWHLVAA
NRAVPLFLAG IPEELLQPPI NVLRLSLHPQ GLGSRIENLG EWRAHVFMRL QHQIDLTNDE
GLIALVKELE TYPGGLKPRE NHEAEFGGLI VPLKLKSDAG TLSFFTATTV FGTAVDITFS
ELIIESFMPG DAFTAAAVRE AMGE
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